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Thermobifida fusca YX (tfus0)
Gene : AAZ54503.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  10/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:200 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->150 3bruB PDBj 4e-09 32.0 %
:RPS:PDB   21->188 3colA PDBj 3e-15 10.3 %
:RPS:SCOP  21->87 1z77A1  a.4.1.9 * 4e-12 29.9 %
:RPS:SCOP  93->192 2genA2  a.121.1.1 * 7e-04 10.0 %
:HMM:SCOP  10->85 2fd5A1 a.4.1.9 * 2.8e-15 35.5 %
:HMM:SCOP  92->198 2gfnA2 a.121.1.1 * 0.00091 19.6 %
:RPS:PFM   21->67 PF00440 * TetR_N 3e-04 38.3 %
:HMM:PFM   21->67 PF00440 * TetR_N 9.6e-16 42.6 47/47  
:HMM:PFM   134->196 PF04655 * APH_6_hur 0.00017 33.9 62/253  
:BLT:SWISS 21->118 YDGC_BACSU 5e-08 30.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54503.1 GT:GENE AAZ54503.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 527456..528058 GB:FROM 527456 GB:TO 528058 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID AAZ54503.1 GB:DB_XREF GI:71914601 InterPro:IPR001647 LENGTH 200 SQ:AASEQ MEKVEKPVRASARGAATRSALLEAASYVFRTSGFDKAGVSEVVAQAGASVGSLYHHFTGKADLYLALYQEFQQRQQERTHQAVVDARAEGENDPRKLMTIAARAYLEGCIEERELTRIFYSGDSPPGFEALMRQQLREWTGRNAALFRKADEPVDEALLMIVTGSISLAATEVIERDPDEARKLADAVVERLSSLTPRKE GT:EXON 1|1-200:0| BL:SWS:NREP 1 BL:SWS:REP 21->118|YDGC_BACSU|5e-08|30.9|97/195| SEG 9->20|rasargaatrsa| BL:PDB:NREP 1 BL:PDB:REP 21->150|3bruB|4e-09|32.0|122/186| RP:PDB:NREP 1 RP:PDB:REP 21->188|3colA|3e-15|10.3|165/177| RP:PFM:NREP 1 RP:PFM:REP 21->67|PF00440|3e-04|38.3|47/47|TetR_N| HM:PFM:NREP 2 HM:PFM:REP 21->67|PF00440|9.6e-16|42.6|47/47|TetR_N| HM:PFM:REP 134->196|PF04655|0.00017|33.9|62/253|APH_6_hur| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 2 RP:SCP:REP 21->87|1z77A1|4e-12|29.9|67/75|a.4.1.9| RP:SCP:REP 93->192|2genA2|7e-04|10.0|100/118|a.121.1.1| HM:SCP:REP 10->85|2fd5A1|2.8e-15|35.5|76/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 92->198|2gfnA2|0.00091|19.6|107/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 10 OP:NHOMOORG 10 OP:PATTERN -------------------------------------------------------------------- -------------1----------11-----1----------------------------------1---1----------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 178 STR:RPRED 89.0 SQ:SECSTR ####################HHHHHHHHHHHHcGGGccHHHHHHHHTccHHHHHTTcccHHHHHHHHHHHHHHTTccHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHHcTTHHHHHHHHHHHHccccGGGTHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHTTcccTTcccHHHHHHHHHTTTccHcHH## DISOP:02AL 1-20, 197-200| PSIPRED cccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccc //