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Thermobifida fusca YX (tfus0)
Gene : AAZ54507.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  39/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.19.1
:276 amino acids
:PSIPRED
:RPS:SCOP  21->241 1oxwA  c.19.1.3 * 6e-13 13.4 %
:HMM:SCOP  1->205 1oxwA_ c.19.1.3 * 3.6e-29 36.9 %
:RPS:PFM   36->187 PF01734 * Patatin 5e-12 40.7 %
:HMM:PFM   5->195 PF01734 * Patatin 6.3e-22 29.9 177/204  
:BLT:SWISS 153->206 RSSA_SHIFL 2e-04 39.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54507.1 GT:GENE AAZ54507.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(530529..531359) GB:FROM 530529 GB:TO 531359 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ54507.1 GB:DB_XREF GI:71914605 LENGTH 276 SQ:AASEQ MGKALVLGGGGIVGLAWEIGVLTGLRDAGVDLRDADVILGTSTGAIAAAQIVSGVALDELYERQLAPAGAEAAARPHWWVRARVAGTLLTARSPRLGRARVGLIAASSARFSQAVREPLLAAHLPARDWPESTHLVVTAVDARSGAVRAFSRTDGVDLLHAVAASSAVPGLWPPVAVDGRWYIDGGVRSATNADLVAGHERVVVVAPSPRGPLLWRQPVTVPFPEGTQCTWVTPSPESRAAFGRDLFNPARRAAAARAGRDQAAEVAVRVARTWGV GT:EXON 1|1-276:0| BL:SWS:NREP 1 BL:SWS:REP 153->206|RSSA_SHIFL|2e-04|39.6|53/314| TM:NTM 2 TM:REGION 2->24| TM:REGION 36->58| SEG 2->20|gkalvlggggivglaweig| SEG 66->74|apagaeaaa| SEG 250->267|arraaaaragrdqaaeva| RP:PFM:NREP 1 RP:PFM:REP 36->187|PF01734|5e-12|40.7|135/182|Patatin| HM:PFM:NREP 1 HM:PFM:REP 5->195|PF01734|6.3e-22|29.9|177/204|Patatin| GO:PFM:NREP 1 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF01734|IPR002641| RP:SCP:NREP 1 RP:SCP:REP 21->241|1oxwA|6e-13|13.4|209/360|c.19.1.3| HM:SCP:REP 1->205|1oxwA_|3.6e-29|36.9|176/0|c.19.1.3|1/1|FabD/lysophospholipase-like| OP:NHOMO 42 OP:NHOMOORG 39 OP:PATTERN -------------------------------------------------------------------- ----1----------1111-11--1111111-111112-1-2-1-----11-1111-1-------1--1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--2--------------------------1------------------------------------------------1-----------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccEEEEEccHHHHHHHHHHHHHHHHHHcccccccccEEEEEcHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccHHcccccccccHHHHHHHHHHHccccccccccEEEEEEEEccccEEEEEcccccccHHHHHHHHcccccccccEEEccEEEEEEEEcccccHHHHHccccEEEEEccccccccccHHHHcccccccEEEEEcccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcc //