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Thermobifida fusca YX (tfus0)
Gene : AAZ54529.1
DDBJ      :             ferredoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  392/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:106 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->105 2v2kA PDBj 1e-47 77.7 %
:RPS:PDB   3->78 1bc6A PDBj 4e-09 55.3 %
:RPS:SCOP  3->59 1durA  d.58.1.1 * 2e-10 51.9 %
:HMM:SCOP  3->105 1q16B_ d.58.1.5 * 9.7e-19 31.7 %
:HMM:PFM   15->27 PF00037 * Fer4 0.00012 53.8 13/24  
:HMM:PFM   34->56 PF00037 * Fer4 1.2e-11 52.2 23/24  
:BLT:SWISS 1->106 FER_SACER 8e-55 84.0 %
:PROS 40->51|PS00198|4FE4S_FER_1
:REPEAT 2|1->27|32->56

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54529.1 GT:GENE AAZ54529.1 GT:PRODUCT ferredoxin GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 558732..559052 GB:FROM 558732 GB:TO 559052 GB:DIRECTION + GB:PRODUCT ferredoxin GB:PROTEIN_ID AAZ54529.1 GB:DB_XREF GI:71914627 InterPro:IPR000813 InterPro:IPR001450 LENGTH 106 SQ:AASEQ MTYVIAQPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIYYEDDLPSEWSDFYKVNVEFFEELGSPGGASKVGKIDRDHPLVAALPPQGE GT:EXON 1|1-106:0| BL:SWS:NREP 1 BL:SWS:REP 1->106|FER_SACER|8e-55|84.0|106/106| PROS 40->51|PS00198|4FE4S_FER_1|PDOC00176| NREPEAT 1 REPEAT 2|1->27|32->56| BL:PDB:NREP 1 BL:PDB:REP 2->105|2v2kA|1e-47|77.7|103/103| RP:PDB:NREP 1 RP:PDB:REP 3->78|1bc6A|4e-09|55.3|76/77| HM:PFM:NREP 2 HM:PFM:REP 15->27|PF00037|0.00012|53.8|13/24|Fer4| HM:PFM:REP 34->56|PF00037|1.2e-11|52.2|23/24|Fer4| RP:SCP:NREP 1 RP:SCP:REP 3->59|1durA|2e-10|51.9|54/55|d.58.1.1| HM:SCP:REP 3->105|1q16B_|9.7e-19|31.7|101/509|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 542 OP:NHOMOORG 392 OP:PATTERN -------------------------------------------------------------------- 122-111122111114433-3322533333343454456924331121122131211111114111222111111111----3-----1-1-----------------2---------------------------11111---11-------------------------------------12111---1-----------------2-----------12-------------------------------------------------------------------------------------------------------------------1-1--------------------111--111----1-2111111111111-1222111211111111111112111111211112222111211112311112111111111111111121111111111111111111111111111111111111111111111111121122222111122222111222211122211111112212331121121-------11111-------------------------111111---------------------------33----111-11------------------12---1111--------------------------------------------------------------------------------------------111111111111111-----------------111111111122221111111111111111111111-----111111111111111111111111----111111------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 98.1 SQ:SECSTR #cEEcccTTTTccccccTTTcTTccEEEccccEEEcTTTccccccHHHHcGGGccEETTTccHHHHHHHHHHHHHTTcTcccccHHHHcccccccHHHHTccccc# DISOP:02AL 104-106| PSIPRED ccEEEccccccccccccHHHcccccEEEcccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccc //