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Thermobifida fusca YX (tfus0)
Gene : AAZ54552.1
DDBJ      :             helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  826/915 : Eukaryota  198/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:503 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->347 2i4iA PDBj 4e-58 41.2 %
:RPS:PDB   16->370 3bxzB PDBj 1e-61 11.2 %
:RPS:SCOP  18->222 1fuuA  c.37.1.19 * 5e-48 33.8 %
:RPS:SCOP  236->380 1oywA3  c.37.1.19 * 5e-21 17.9 %
:HMM:SCOP  88->379 1wp9A2 c.37.1.19 * 2.1e-75 40.5 %
:RPS:PFM   43->205 PF00270 * DEAD 3e-40 50.9 %
:RPS:PFM   281->339 PF00271 * Helicase_C 5e-13 50.8 %
:HMM:PFM   42->208 PF00270 * DEAD 1.4e-52 47.6 164/167  
:HMM:PFM   281->356 PF00271 * Helicase_C 6.6e-29 50.0 76/78  
:BLT:SWISS 20->393 EXP9_STRR6 2e-82 43.6 %
:PROS 168->176|PS00039|DEAD_ATP_HELICASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54552.1 GT:GENE AAZ54552.1 GT:PRODUCT helicase, C-terminal:DEAD/DEAH box helicase, N-terminal GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(581156..582667) GB:FROM 581156 GB:TO 582667 GB:DIRECTION - GB:PRODUCT helicase, C-terminal:DEAD/DEAH box helicase, N-terminal GB:PROTEIN_ID AAZ54552.1 GB:DB_XREF GI:71914650 InterPro:IPR000629 InterPro:IPR001410 InterPro:IPR001650 InterPro:IPR011545 LENGTH 503 SQ:AASEQ MEASTLTTVRSTHSSDQTTFRDLGVIDDIADALEAEGIVAPFPIQSMALPLALTGADIIGQARTGTGKTFAFGLPLLQRVHTQPGSAKRPRALVVVPTRELAIQVAADLATASKRIDVRIATVYGGRAYEPQISALRKGVDIVVGTPGRLLDLVKQRHLILSEVTALVLDEADKMLDLGFLPDIERILAKTPDQRQTMLFSATMPSEIVALSRKYLRRPTHIRAEDDPLDTGSGQVTQHVFRTHPLDKLEMLARLLQARNRGLTMVFCQTKRECHHVSTELCRRGFAAAAVHGDLGQGQRERALRAFRNGKVDVLVATDVAARGIDVDDVTHVVNYECPDDEKTYTHRIGRTGRAGRSGTAVTFIDWQELLRWKLINRALGLPFADPPETYSTSPHFFDALDIPRDAKGVLAKEEQDRAGLAAEEVEDIGETGRASRTKDRERSRQRRSRPRKRTRRGVPTTRSAAEPTGETAAKSDADSSARTRRRTRRRSRRNAGTNSDRA GT:EXON 1|1-503:0| BL:SWS:NREP 1 BL:SWS:REP 20->393|EXP9_STRR6|2e-82|43.6|369/524| PROS 168->176|PS00039|DEAD_ATP_HELICASE|PDOC00039| SEG 348->361|rigrtgragrsgta| SEG 437->463|rtkdrersrqrrsrprkrtrrgvpttr| SEG 476->494|sdadssartrrrtrrrsrr| BL:PDB:NREP 1 BL:PDB:REP 19->347|2i4iA|4e-58|41.2|323/408| RP:PDB:NREP 1 RP:PDB:REP 16->370|3bxzB|1e-61|11.2|347/440| RP:PFM:NREP 2 RP:PFM:REP 43->205|PF00270|3e-40|50.9|161/167|DEAD| RP:PFM:REP 281->339|PF00271|5e-13|50.8|59/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 42->208|PF00270|1.4e-52|47.6|164/167|DEAD| HM:PFM:REP 281->356|PF00271|6.6e-29|50.0|76/78|Helicase_C| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 2 RP:SCP:REP 18->222|1fuuA|5e-48|33.8|201/215|c.37.1.19| RP:SCP:REP 236->380|1oywA3|5e-21|17.9|145/200|c.37.1.19| HM:SCP:REP 88->379|1wp9A2|2.1e-75|40.5|269/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 10279 OP:NHOMOORG 1077 OP:PATTERN 11-1--2111111122121221-1-------11111111111111111131121---2221211--11 1121333333332332322-23113322222233333555-32333432444334323--4432333575211111111131-11111555413221--51664379816--------------222123232312111111111121-1211----22222121-2222111111111111131111--1124555555554555555434444555222325444444455322222222222222222223333333333333334433333222233333333333333333323333333333333333333333333-533655555555553422433334-2-121115334-1111------114-3323322212333333223433333333333333-3333333324223333333333333324333243344325555555536663323------------111111111111111111333324444355555554444445544443455544452344454544565554554343353222222222244574625253214333-444534554333365524--1-------11111111151115229A7646C789AACCCCCCCDDDCBCDCCBC1-2222311111154555555555555555-55555555555555555555555544555555555555454455554555541544556644556114511111333335448323333233333333222222222256666677777666677673222222226AAAA999998BBBB44555555553333232-332222--------11322212---1--11---11111-11112111------35 OPLOWSR5*SQKQPTPQPMNPPPQQPPPPPPPPNNNORNPOOPOONNPOOOPPPPRPOPPOPONNOOOHOPNNONPQLQQONMNNMMN-MXPQMQSRNPOPMQbdcAS*V*jvjphvWUUQVcVtqT*S**l3uh*SXZTlUZhTPaZSRcSKvWhWTZY*wgZVUWkZe*gmiTMZYg*hfbTbvm**OztZYeXYZc --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 422 STR:RPRED 83.9 SQ:SECSTR ###cEEEEEEEEEEETTccGGGcHHHHHHHHHHHHHHHTcccccHHHHHHHHHTTTTEEEEccTTccHHHHTHHHHHHHTTccccTGccccEEEEEccHHHHHHHHHTTHHHHHHTTccEEEccTTccHHHHHHHHHccEEEEEHHHHHHHHHcccccccEEEEETHHHHHTTcccccEEccEEccTTTGGGcccEEEEEEccccTTccHHHHHcccEEEEccccccHHcccEEcccEEEccHHHHHHHHHHHHHHHHHHTccEEEEcccHHHHHHHHHHHHHTcccccEEccccHHHHHHHHTTTTccccEEEEcTTccTTccccTTccTHEEEccccccTTHHHHHHHTccGGGcccEEEEEEEHHHHHHHHHHHHHTTcccccccGHTTHHHHHHHTHHHHHHHHHTGGGGHHHHHHHTTcc############################################################################## DISOP:02AL 1-3, 8-17, 396-503| PSIPRED cccccEEEEccccccccccHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHcccccccccEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHcccEEEEEccHHHHHHHHcccEEEcccEEEEEEccHHccccccHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHccccEEEEEEcccccccccccEEEEEEEccHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccccEEEEEcHHHcccccccccEEEEEcccccHHHcEEccccccccccccEEEEEEcHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //