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Thermobifida fusca YX (tfus0)
Gene : AAZ54574.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  80/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.92.1
:467 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   129->434 3cmnA PDBj 6e-15 31.5 %
:RPS:PDB   233->404 3bk9B PDBj 6e-10 17.4 %
:RPS:SCOP  205->434 3cmnA1  d.92.1.16 * 4e-13 25.9 %
:RPS:PFM   83->430 PF10103 * DUF2342 6e-76 47.8 %
:HMM:PFM   83->434 PF10103 * DUF2342 8.2e-128 48.7 337/342  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54574.1 GT:GENE AAZ54574.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(607978..609381) GB:FROM 607978 GB:TO 609381 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ54574.1 GB:DB_XREF GI:71914672 LENGTH 467 SQ:AASEQ MNDLPFGFSMSNGPDDESGRGPNDSGSGAGQGGSGGGFPHMPPGGFPFGDPQQFAQMLRQFADMMSAAQPTSGSGQDSGASGINWAAATNIARHVVSQHGDPSIGPVDYARVQEALRLADLWLNEVTALPSGLHTMEAWSRSEWVEKTVPTWTKLCEPLTGRVVETMGQNLPQEMAAVAGPLLGMFRQIGGALVGQQVGQAIGELAREVVGSTDVGLPLAGEGRAVLLPEGVREFGEGLGVPLDEVRLYLAAREAAHHRLFRHVPWLRSHLFALVEEYAAGMSFDISGFEKQLGHIDLTNPESLQEALSSLEGQGLFQTEDTPRQKASLARLETALALIEGWVSTVVDAAVSQRLPQAAALGEALRRRRASGGPAEHTFATLVGLELRPRRLRDAAKLWQALTEARGIDGRDAVWEHPDLMPSGEDLDAPDDFVRGSASSPDLDLSQLTEEPSEERRDGDDEDKGER GT:EXON 1|1-467:0| SEG 21->53|gpndsgsgagqggsgggfphmppggfpfgdpqq| SEG 188->203|qiggalvgqqvgqaig| SEG 358->370|aaalgealrrrra| SEG 454->466|eerrdgddedkge| BL:PDB:NREP 1 BL:PDB:REP 129->434|3cmnA|6e-15|31.5|241/298| RP:PDB:NREP 1 RP:PDB:REP 233->404|3bk9B|6e-10|17.4|149/280| RP:PFM:NREP 1 RP:PFM:REP 83->430|PF10103|6e-76|47.8|335/340|DUF2342| HM:PFM:NREP 1 HM:PFM:REP 83->434|PF10103|8.2e-128|48.7|337/342|DUF2342| RP:SCP:NREP 1 RP:SCP:REP 205->434|3cmnA1|4e-13|25.9|189/294|d.92.1.16| OP:NHOMO 100 OP:NHOMOORG 80 OP:PATTERN -------------------------------------------------------------------- ----211111111111111-1111111111111111111122212111211122221211222122212221111111----1-----------------------------------------------------11111---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 281 STR:RPRED 60.2 SQ:SECSTR ################################################################################################################################ccccccEEEEccHHHHHHHHHHHHHHTTHH#####HHHHHHccHHHHHHHHHHHHHH###################HHTTcccTTccHHHHHcHHHHHTTGGGcHHHHHHTTcccTHHHHTTTTcHHHHHHHHHTcHHTcccHHHHHHHHHHHTTccccGTccGGGcccTTccccccTTHHTcH#HHHHHHHHcTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccTTcccTHHHHHHTTccHHHHTccccHHHHHGGGTHHcHHHHGGGGccGGGcccHHHHHcHHHHH################################# DISOP:02AL 1-3, 8-39, 67-81, 97-103, 169-180, 301-312, 367-376, 446-467| PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccccccccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHccccccccccccHHHHcccHHHcccccccccccHHHHHHcHHHccccccccccccc //