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Thermobifida fusca YX (tfus0)
Gene : AAZ54605.1
DDBJ      :             possible regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  61/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:126 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->102 2g9wA PDBj 1e-10 33.3 %
:RPS:PDB   8->118 1bibA PDBj 4e-04 7.5 %
:RPS:SCOP  8->118 2g9wA1  a.4.5.39 * 1e-07 27.9 %
:HMM:SCOP  2->118 1okrA_ a.4.5.39 * 4.8e-19 28.4 %
:RPS:PFM   7->117 PF03965 * Pencillinase_R 4e-16 47.3 %
:HMM:PFM   7->116 PF03965 * Pencillinase_R 9.7e-26 36.7 109/115  
:BLT:SWISS 2->102 BLAI_MYCTU 1e-16 38.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54605.1 GT:GENE AAZ54605.1 GT:PRODUCT possible regulator GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 644969..645349 GB:FROM 644969 GB:TO 645349 GB:DIRECTION + GB:PRODUCT possible regulator GB:PROTEIN_ID AAZ54605.1 GB:DB_XREF GI:71914703 InterPro:IPR011585 LENGTH 126 SQ:AASEQ MKIREFGELESAIMDALWKADRPLSVREIRETMTYRRNIAYTTVMTVANILVNKGILDREKVGRAWRYQPRESREEHTARIMSEVLHSGGDRGATMIRLIEQFSDEEMTRLHEALSEMRIRRGIAS GT:EXON 1|1-126:0| BL:SWS:NREP 1 BL:SWS:REP 2->102|BLAI_MYCTU|1e-16|38.6|101/138| BL:PDB:NREP 1 BL:PDB:REP 2->102|2g9wA|1e-10|33.3|96/116| RP:PDB:NREP 1 RP:PDB:REP 8->118|1bibA|4e-04|7.5|106/294| RP:PFM:NREP 1 RP:PFM:REP 7->117|PF03965|4e-16|47.3|110/115|Pencillinase_R| HM:PFM:NREP 1 HM:PFM:REP 7->116|PF03965|9.7e-26|36.7|109/115|Pencillinase_R| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF03965|IPR005650| GO:PFM GO:0016481|"GO:negative regulation of transcription"|PF03965|IPR005650| GO:PFM GO:0016566|"GO:specific transcriptional repressor activity"|PF03965|IPR005650| RP:SCP:NREP 1 RP:SCP:REP 8->118|2g9wA1|1e-07|27.9|111/119|a.4.5.39| HM:SCP:REP 2->118|1okrA_|4.8e-19|28.4|116/120|a.4.5.39|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 93 OP:NHOMOORG 61 OP:PATTERN -------------------------------------------------------------------- --2-2--1111---31111-16112111111242542313--121--1-111111--1--11---112222--------------1---------------------------------------------------1111---1------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 117 STR:RPRED 92.9 SQ:SECSTR #cGGGccHHHHHHHHHHTTccccccHHHHHHHHTTHHTccHHHHHHHHHHHHHTTcccEEETTTEEEcccccccccHHHHHHTcccccEEEccEEccHHHHHHHHGGGccTTcEEEEc######## DISOP:02AL 1-3, 120-126| PSIPRED cccccccHHHHHHHHHHHHccccccHHHHHHHHcccccccHHHHHHHHHHHHHcccccEEEccccEEEEEcccHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccc //