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Thermobifida fusca YX (tfus0)
Gene : AAZ54606.1
DDBJ      :             succinyldiaminopimelate aminotransferase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  851/915 : Eukaryota  188/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:391 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->385 2o0rB PDBj 1e-92 47.7 %
:RPS:PDB   16->388 2douB PDBj 9e-50 23.1 %
:RPS:SCOP  1->386 1vp4A  c.67.1.1 * 2e-49 18.7 %
:HMM:SCOP  3->391 1w7lA_ c.67.1.1 * 1.1e-111 34.9 %
:RPS:PFM   42->381 PF00155 * Aminotran_1_2 2e-27 33.1 %
:HMM:PFM   29->385 PF00155 * Aminotran_1_2 3.3e-64 25.9 344/363  
:BLT:SWISS 2->386 YBDL_ECOLI 2e-71 38.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54606.1 GT:GENE AAZ54606.1 GT:PRODUCT succinyldiaminopimelate aminotransferase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 645422..646597 GB:FROM 645422 GB:TO 646597 GB:DIRECTION + GB:PRODUCT succinyldiaminopimelate aminotransferase GB:PROTEIN_ID AAZ54606.1 GB:DB_XREF GI:71914704 InterPro:IPR001176 LENGTH 391 SQ:AASEQ MSEPLVARMAAFGETIFAEMTRLAEHTGAINLGQGFPDTDGPPFLLAEAARYLTEGVNQYPPGYGREELRTAIAADRQERYGLAYDPATEVYITVGATAGIAASILALVEPGDEVVLFEPMYDSYSAVIALAHGVRRPVTLRPSPDNGRYTFDPDELAAAITPRTRAIIVNTPHNPTGTVFTADELAWIARLCRENDLVAVTDEVYEHLTFDGTPHLPLAALPGMAERTLSVSSAGKTFSVTGWKIGWVTGPEPLVRAVATVNQYLTFTANGAQQLAVATALRHGMDWVSEQRDALHAKRDRLVAGLAAAGFQVHPPQGTYFVMADIRPLGYDDGLTFVRTLARRAGVVAIPAQVFYADERHGRHLVRFAFCKRDDVLDEAAARLRAWGDR GT:EXON 1|1-391:0| BL:SWS:NREP 1 BL:SWS:REP 2->386|YBDL_ECOLI|2e-71|38.4|380/386| TM:NTM 1 TM:REGION 89->111| SEG 158->169|aaaitprtraii| BL:PDB:NREP 1 BL:PDB:REP 6->385|2o0rB|1e-92|47.7|377/383| RP:PDB:NREP 1 RP:PDB:REP 16->388|2douB|9e-50|23.1|360/368| RP:PFM:NREP 1 RP:PFM:REP 42->381|PF00155|2e-27|33.1|326/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 29->385|PF00155|3.3e-64|25.9|344/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 1 RP:SCP:REP 1->386|1vp4A|2e-49|18.7|380/420|c.67.1.1| HM:SCP:REP 3->391|1w7lA_|1.1e-111|34.9|387/0|c.67.1.1|1/1|PLP-dependent transferases| OP:NHOMO 4634 OP:NHOMOORG 1105 OP:PATTERN 22323223222222325523222454454375111332222226544544555-44454561223-23 4484845555625345444-45226643444656666786454646773453A9A55711354-657576478888773336344433567546--112434344544341111111--------3334332322434445333554444444332222222234346556131111131111245441128487787898A688899849655988967754446665659822222222222222122232634346391329977671725845544443233455444444444442222222222222455766555536464888887848438664333435-32534365355213453443333633444411111318565545444444444444447-558559567B31966878B8777A7624256666667785555555565545655211111111111111111111111111112146234B947A9A8898566677CC757655879867813559766656585C5346453325222222244445517732547375666-52442335477577446332222222221222222223443444443362113111221111111211112112---3553------67783765556587655-5565566555555555555686642225656465555565664A43544451-555575466777--1111111433355455111112-1111111144444342336377677A9B687765666434324323443331111121321333444433412222264222222--------1---------------------------4333324222344 ----225-521-22424333563656533232232334444444443345345423333322333112221131311-1114342411-5A446432224522555-27554747472222343E5-92FM6-7573423634A42332232143434631245442521244444444n5543799BL3F455A8A89 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 391 STR:RPRED 100.0 SQ:SECSTR ccHcccHHHHTcccccHHHHHHHHHHHHHEEcccccccccccHHHHHHHHHHHTcGGcccccHHHHHHHHHHHHHHHHHHHcccccTTTcEEEEccHHHHHHHHHHHTccTTcEEEEEccccHHHHHHHHHTTcEEEEEcccTTcccTTccccGGGccHHHHHHEEEEEEccccTTTcccccHHHHHHHHHHHHHHTcEEEEEcTTTTcccccccccGGGccTTGGGTEEEEEEHHHHHTcGGGccEEEEEcHHHHHHHHHHHHTTcccccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHTTTTTcEEcccccccEEEEEccccccHHHHHHHHHHHHHHTTEEcEEGGGGcGGTEHGTTEEEEEccccHHHHHHHHHHHHHTHHH DISOP:02AL 1-3| PSIPRED ccHHHHHHHccccccHHHHHHHHHcccccEEcccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccEEEEccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHccEEEEEEEccccccccccccHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccHHHcccccccEEEEEccHHHHccHHHHEEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccEEEEEEccccccccHHHHHHHHHHHccEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHHHHHHcc //