[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ54614.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  203/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.5d.113.1
:243 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->229 3gz5B PDBj 3e-16 32.6 %
:RPS:PDB   30->156 2b0vA PDBj 7e-14 11.1 %
:RPS:SCOP  16->159 2fb1A2  d.113.1.6 * 4e-18 25.2 %
:RPS:SCOP  162->236 2fb1A1  a.4.5.68 * 8e-20 32.9 %
:HMM:SCOP  30->160 2fb1A2 d.113.1.6 * 2.3e-30 39.2 %
:HMM:SCOP  161->238 2fb1A1 a.4.5.68 * 1.6e-16 43.4 %
:RPS:PFM   42->146 PF00293 * NUDIX 2e-05 32.0 %
:HMM:PFM   30->143 PF00293 * NUDIX 1.1e-15 25.5 110/135  
:BLT:SWISS 26->146 ADPP_METJA 5e-09 30.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54614.1 GT:GENE AAZ54614.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 657742..658473 GB:FROM 657742 GB:TO 658473 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ54614.1 GB:DB_XREF GI:71914712 InterPro:IPR000086 LENGTH 243 SQ:AASEQ MDGVGADPANLAQVRHPTENTSGTAHEVLAVVFQIRQDRLCVLIWQRGRPPYEGLWALPGGRLGATEGLGESIRRQLAQKVDVRELAHLEQLQTWGDPNRHPLGRVVATAYLGLVPAGIDPLIPDDTQWFPVTDLPPMAFDHAAMVGAARQRLRAKLSYTNIGFALAPPEFTISELSRYYRAALGHDVTATNLRRILLRRGQIEETGRSVPSGRLGGRPAALFRFRTRTLEITDAFAVLRPPT GT:EXON 1|1-243:0| BL:SWS:NREP 1 BL:SWS:REP 26->146|ADPP_METJA|5e-09|30.2|116/169| BL:PDB:NREP 1 BL:PDB:REP 30->229|3gz5B|3e-16|32.6|193/216| RP:PDB:NREP 1 RP:PDB:REP 30->156|2b0vA|7e-14|11.1|126/146| RP:PFM:NREP 1 RP:PFM:REP 42->146|PF00293|2e-05|32.0|100/132|NUDIX| HM:PFM:NREP 1 HM:PFM:REP 30->143|PF00293|1.1e-15|25.5|110/135|NUDIX| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00293|IPR000086| RP:SCP:NREP 2 RP:SCP:REP 16->159|2fb1A2|4e-18|25.2|143/147|d.113.1.6| RP:SCP:REP 162->236|2fb1A1|8e-20|32.9|73/76|a.4.5.68| HM:SCP:REP 30->160|2fb1A2|2.3e-30|39.2|130/0|d.113.1.6|1/1|Nudix| HM:SCP:REP 161->238|2fb1A1|1.6e-16|43.4|76/0|a.4.5.68|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 262 OP:NHOMOORG 207 OP:PATTERN ---1--------------------------------------------1------------------- ----1-11111--111111-12111211111122222122-3232121----222111--11--21122211111111------------11-1-----2-5131415-2--------------------------11111---1-2112111-1--------111-1111------------111------------------------------------1--------21--------------------1---11-1-----1111--------------------------------------------------------1---------------------1---11----------------------1--1------112211------------------22123122-11--112121--111-1111-------------------------1-----------------------------------11111-----------------------------------1--21--1--------1-1111111-------1--------------------------11-----------------------------111--1--1-------------1-1--1------1---------1------------------------------------------1-----------------------------------------------------1-----------------1111111111-1111111-11---1-----------------------11-11----------------------------------------------------------------------111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------22--------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 216 STR:RPRED 88.9 SQ:SECSTR #############EETTccTTcccEcEEEEEEEEEcEETTEEEEEEEcccccccEEEccEEEccTTccHHHHHHHHHHHHHcEcEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEcTTccccTEEEEEHHHHHHTGGcccTHHHHHHHHHTTcHHHTTccTTccccTTTcTTHHHHHHHTTcccccHHHHHHHHHHHTcEEEEEEEEccTEEccccEEEEEEcGGG############## DISOP:02AL 1-4, 212-214, 242-243| PSIPRED cccccccccccccccccccccccccEEEEEEEEEEEccccEEEEEEcccccccccEEcccccccccccHHHHHHHHHHHHHccccccEEEEEEEEccccccccEEEEEEEEEEEEcccccccccccEEEEEHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHcccEEEcccEEccccccccccEEEEEccHHHHcccccccccccc //