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Thermobifida fusca YX (tfus0)
Gene : AAZ54658.1
DDBJ      :             cellobiohydrolase. Glycosyl Hydrolase family 6.
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  41/915 : Eukaryota  34/199 : Viruses  0/175   --->[See Alignment]
b.2.2c.6.1
:596 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   34->139 1exgA PDBj 2e-33 57.5 %
:BLT:PDB   242->596 3a64A PDBj 4e-39 40.1 %
:RPS:PDB   40->136 2cwrA PDBj 1e-23 20.9 %
:RPS:PDB   181->596 1bvwA PDBj 7e-93 35.7 %
:RPS:SCOP  34->139 1exgA  b.2.2.1 * 6e-33 55.7 %
:RPS:SCOP  181->596 1bvwA  c.6.1.1 * 1e-93 35.7 %
:HMM:SCOP  35->142 1exhA_ b.2.2.1 * 7.4e-36 53.7 %
:HMM:SCOP  179->596 2bvwA_ c.6.1.1 * 1.6e-109 49.3 %
:RPS:PFM   42->129 PF00553 * CBM_2 2e-19 59.1 %
:RPS:PFM   192->536 PF01341 * Glyco_hydro_6 9e-54 57.0 %
:HMM:PFM   197->550 PF01341 * Glyco_hydro_6 5.9e-101 48.9 282/300  
:HMM:PFM   41->139 PF00553 * CBM_2 4.7e-35 47.5 99/101  
:BLT:SWISS 38->139,179->594 GUXA_CELFI e-117 54.5 %
:PROS 256->272|PS00655|GLYCOSYL_HYDROL_F6_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54658.1 GT:GENE AAZ54658.1 GT:PRODUCT cellobiohydrolase. Glycosyl Hydrolase family 6. GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(719475..721265) GB:FROM 719475 GB:TO 721265 GB:DIRECTION - GB:PRODUCT cellobiohydrolase. Glycosyl Hydrolase family 6. GB:PROTEIN_ID AAZ54658.1 GB:DB_XREF GI:71914756 InterPro:IPR001524 InterPro:IPR001919 InterPro:IPR006311 LENGTH 596 SQ:AASEQ MSKVRATNRRSWMRRGLAAASGLALGASMVAFAAPANAAGCSVDYTVNSWGTGFTANVTITNLGSAINGWTLEWDFPGNQQVTNLWNGTYTQSGQHVSVSNAPYNASIPANGTVEFGFNGSYSGSNDIPSSFKLNGVTCDGSDDPDPEPSPSPSPSPSPTDPDEPGGPTNPPTNPGEKVDNPFEGAKLYVNPVWSAKAAAEPGGSAVANESTAVWLDRIGAIEGNDSPTTGSMGLRDHLEEAVRQSGGDPLTIQVVIYNLPGRDCAALASNGELGPDELDRYKSEYIDPIADIMWDFADYENLRIVAIIEIDSLPNLVTNVGGNGGTELCAYMKQNGGYVNGVGYALRKLGEIPNVYNYIDAAHHGWIGWDSNFGPSVDIFYEAANASGSTVDYVHGFISNTANYSATVEPYLDVNGTVNGQLIRQSKWVDWNQYVDELSFVQDLRQALIAKGFRSDIGMLIDTSRNGWGGPNRPTGPSSSTDLNTYVDESRIDRRIHPGNWCNQAGAGLGERPTVNPAPGVDAYVWVKPPGESDGASEEIPNDEGKGFDRMCDPTYQGNARNGNNPSGALPNAPISGHWFSAQFRELLANAYPPL GT:EXON 1|1-596:0| BL:SWS:NREP 1 BL:SWS:REP 38->139,179->594|GUXA_CELFI|e-117|54.5|506/872| PROS 256->272|PS00655|GLYCOSYL_HYDROL_F6_1|PDOC00563| SEG 16->28|glaaasglalgas| SEG 140->177|dgsddpdpepspspspspsptdpdepggptnpptnpge| SEG 318->327|vtnvggnggt| BL:PDB:NREP 2 BL:PDB:REP 34->139|1exgA|2e-33|57.5|106/110| BL:PDB:REP 242->596|3a64A|4e-39|40.1|292/371| RP:PDB:NREP 2 RP:PDB:REP 40->136|2cwrA|1e-23|20.9|91/97| RP:PDB:REP 181->596|1bvwA|7e-93|35.7|345/360| RP:PFM:NREP 2 RP:PFM:REP 42->129|PF00553|2e-19|59.1|88/94|CBM_2| RP:PFM:REP 192->536|PF01341|9e-54|57.0|272/297|Glyco_hydro_6| HM:PFM:NREP 2 HM:PFM:REP 197->550|PF01341|5.9e-101|48.9|282/300|Glyco_hydro_6| HM:PFM:REP 41->139|PF00553|4.7e-35|47.5|99/101|CBM_2| GO:PFM:NREP 5 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF00553|IPR001919| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00553|IPR001919| GO:PFM GO:0030246|"GO:carbohydrate binding"|PF00553|IPR001919| GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF01341|IPR016288| GO:PFM GO:0030245|"GO:cellulose catabolic process"|PF01341|IPR016288| RP:SCP:NREP 2 RP:SCP:REP 34->139|1exgA|6e-33|55.7|106/110|b.2.2.1| RP:SCP:REP 181->596|1bvwA|1e-93|35.7|345/360|c.6.1.1| HM:SCP:REP 35->142|1exhA_|7.4e-36|53.7|108/0|b.2.2.1|1/1|Carbohydrate-binding domain| HM:SCP:REP 179->596|2bvwA_|1.6e-109|49.3|347/0|c.6.1.1|1/1|Glycosyl hydrolases family 6, cellulases| OP:NHOMO 271 OP:NHOMOORG 75 OP:PATTERN -------------------------------------------------------------------- ----R---------111----1--3---1-132-------9--1----9-----------44--J--CB2D-----------------------------------------------------------------1-------E----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------1--1-----------------------------------------------------------1----------------------------------E-------------------------------------------------------------------------------------------------------------------------------------2-4----------------------------L--------------------------------------------2-221111111----------------------------------------------------------- -1---------------4321221212-------------------1111111144343333---------------------------1-1-51--------------------------------------------------------------------------------------------4-3--------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 512 STR:RPRED 85.9 SQ:SECSTR #################################ccccccccEEEEEEEEcccEEEEEEEEEEccccccccEEEEEEcTTcEEEEEEcEEEEEETTEEEEEEcTTcEccccccEEEEEEEEEccccccEEEEEEETTEEE#######################################cccTTTTcEEcccHHHHHHHHHTTGGGHHTTccccEEEccGGGGGGGGGTTTHHHHHHHHHHHHHHTTccccEEEEEEEcccTTccTTcccccccccGGGHHHHHHHHHHHHHHHTTcHHHTTTccEEEEEcTTcTHHHHHcTHHcTTcHHHHHHHHHHHHHHHHHHHHHHTcHcTTEEEEEEcccTTTTccHHHHHHHHHHHHHHHHHTTccTcTEEEEEEcTTcccccccccccGccccccccccccGGGTTcccccHHHHHHHHHHHHHHTTcccccEEEEEcTTccccccccccccccT##########cccccccTTcccccccccccccccccccTTEEEEEccccTTcccccccT##cTTcTTccGGGGcTTcTTccGGGGcTTcccccccTTcccHHHHHHHHHTccccc DISOP:02AL 1-2, 4-5, 150-175, 203-204, 595-596| PSIPRED ccccccccHHHHHHHHHHHcccccccccccccccccccccEEEEEEEccccccEEEEEEEEEcccccccEEEEEEEccccEEEcccccEEEEEccEEEEEccHHcccccccccEEEEEEEEcccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHccccccccHHHccHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHHHHHHHHHHcccHHHEEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccc //