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Thermobifida fusca YX (tfus0)
Gene : AAZ54689.1
DDBJ      :             RNAse III
Swiss-Prot:RNC_THEFY    RecName: Full=Ribonuclease 3;         EC=3.1.26.3;AltName: Full=Ribonuclease III;         Short=RNase III;

Homologs  Archaea  10/68 : Bacteria  891/915 : Eukaryota  122/199 : Viruses  2/175   --->[See Alignment]
a.149.1d.50.1
:240 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->155 2a11A PDBj 3e-49 65.2 %
:BLT:PDB   167->201 1di2A PDBj 5e-04 51.4 %
:RPS:PDB   8->212 3c4bA PDBj 9e-46 27.5 %
:RPS:SCOP  9->154 1o0wA1  a.149.1.1 * 1e-46 44.5 %
:RPS:SCOP  158->212 1qu6A1  d.50.1.1 * 1e-14 21.8 %
:HMM:SCOP  7->167 1o0wA1 a.149.1.1 * 2.3e-47 48.7 %
:HMM:SCOP  117->229 1whnA_ d.50.1.1 * 1.9e-28 58.2 %
:RPS:PFM   46->136 PF00636 * Ribonuclease_3 2e-21 52.7 %
:RPS:PFM   165->212 PF00035 * dsrm 2e-07 47.9 %
:HMM:PFM   46->136 PF00636 * Ribonuclease_3 1.4e-25 45.1 91/105  
:HMM:PFM   164->227 PF00035 * dsrm 1.1e-20 46.9 64/67  
:BLT:SWISS 1->240 RNC_THEFY e-122 100.0 %
:PROS 46->54|PS00517|RNASE_3_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54689.1 GT:GENE AAZ54689.1 GT:PRODUCT RNAse III GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 753798..754520 GB:FROM 753798 GB:TO 754520 GB:DIRECTION + GB:PRODUCT RNAse III GB:PROTEIN_ID AAZ54689.1 GB:DB_XREF GI:71914787 InterPro:IPR000999 InterPro:IPR001159 InterPro:IPR011907 LENGTH 240 SQ:AASEQ MGTQLSPAEVREFQETVGVEIAPDILTRALTHRSYAYENGGLPTNERLEFLGDSVLGLVVTDTLYRTHPDLSEGQLAKLRAAVVNMRALADVARELGIGRYVRLGRGEEATGGRDKSSILADTLEALIGAVYLDRGLDEASELVHRLFDPLIARASGLGAGLDWKTSLQELTAAELLGVPEYVVEESGPDHQKTFRATVRVAGQTYGSGEGRSKKEAEQQAAESAWKAIRAATEKAKQES GT:EXON 1|1-240:0| SW:ID RNC_THEFY SW:DE RecName: Full=Ribonuclease 3; EC=3.1.26.3;AltName: Full=Ribonuclease III; Short=RNase III; SW:GN Name=rnc; OrderedLocusNames=Tfu_0651; SW:KW Complete proteome; Cytoplasm; Endonuclease; Hydrolase; Nuclease;RNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->240|RNC_THEFY|e-122|100.0|240/240| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| PROS 46->54|PS00517|RNASE_3_1|PDOC00448| SEG 213->228|skkeaeqqaaesawka| BL:PDB:NREP 2 BL:PDB:REP 15->155|2a11A|3e-49|65.2|141/154| BL:PDB:REP 167->201|1di2A|5e-04|51.4|35/69| RP:PDB:NREP 1 RP:PDB:REP 8->212|3c4bA|9e-46|27.5|193/238| RP:PFM:NREP 2 RP:PFM:REP 46->136|PF00636|2e-21|52.7|91/93|Ribonuclease_3| RP:PFM:REP 165->212|PF00035|2e-07|47.9|48/66|dsrm| HM:PFM:NREP 2 HM:PFM:REP 46->136|PF00636|1.4e-25|45.1|91/105|Ribonuclease_3| HM:PFM:REP 164->227|PF00035|1.1e-20|46.9|64/67|dsrm| GO:PFM:NREP 5 GO:PFM GO:0003723|"GO:RNA binding"|PF00636|IPR000999| GO:PFM GO:0004525|"GO:ribonuclease III activity"|PF00636|IPR000999| GO:PFM GO:0006396|"GO:RNA processing"|PF00636|IPR000999| GO:PFM GO:0003725|"GO:double-stranded RNA binding"|PF00035|IPR001159| GO:PFM GO:0005622|"GO:intracellular"|PF00035|IPR001159| RP:SCP:NREP 2 RP:SCP:REP 9->154|1o0wA1|1e-46|44.5|146/169|a.149.1.1| RP:SCP:REP 158->212|1qu6A1|1e-14|21.8|55/90|d.50.1.1| HM:SCP:REP 7->167|1o0wA1|2.3e-47|48.7|156/169|a.149.1.1|1/1|RNase III domain-like| HM:SCP:REP 117->229|1whnA_|1.9e-28|58.2|91/0|d.50.1.1|1/1|dsRNA-binding domain-like| OP:NHOMO 1118 OP:NHOMOORG 1025 OP:PATTERN --------------------------------1-----111111-131-------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111--111111111111111111111111111111111111111111111111121332111111111122-1222211111-11-11------11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11--1111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111111111111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111--111111111111111-111111111111111111111111111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111-111111111111111111111111 ----111-----1141----211---111-------1111111-11-------------111-11-1--1-21111----1111-121--11-221-------223----21-1212111111-231414C2-31511111111-1111121131111113221111111312211---------3655-34--11221 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--- STR:NPRED 207 STR:RPRED 86.2 SQ:SECSTR #####HcTTHHHHHHHHTccccHHHHHHHHccTTcTTccTcccccHHHHHHHHHHHHHHHHHHHHHcTTcccHHHHHHHHHHHccHHHHHHHHHHTTGGGTcccccHHHHHcccccccHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcTTTEEEcccEEccTTccEccTTccEEEEEEETTTEEEEEEEc############################ DISOP:02AL 1-6, 8-10, 108-117, 230-240| PSIPRED ccccccHHHHHHHHHHccccccHHHHHHHHHcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHcccccEEEEcccHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHccccEEEEEEcccccccEEEEEEEEccEEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccc //