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Thermobifida fusca YX (tfus0)
Gene : AAZ54721.1
DDBJ      :             Conserved hypothetical protein 48
Swiss-Prot:RLMN_THEFY   RecName: Full=Ribosomal RNA large subunit methyltransferase N;         EC=2.1.1.-;AltName: Full=23S rRNA m2A2503 methyltransferase;

Homologs  Archaea  1/68 : Bacteria  793/915 : Eukaryota  39/199 : Viruses  0/175   --->[See Alignment]
c.1.28c.92.1
:365 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   26->362 2a5hA PDBj 5e-25 13.8 %
:RPS:SCOP  175->302 1tjnA  c.92.1.3 * 4e-07 9.0 %
:HMM:SCOP  115->350 1tv8A_ c.1.28.3 * 1.3e-13 20.6 %
:RPS:PFM   125->265 PF04055 * Radical_SAM 1e-06 37.2 %
:HMM:PFM   121->292 PF04055 * Radical_SAM 5.3e-13 23.8 151/166  
:HMM:PFM   302->357 PF04234 * CopC 0.00015 30.4 56/121  
:BLT:SWISS 1->365 RLMN_THEFY 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54721.1 GT:GENE AAZ54721.1 GT:PRODUCT Conserved hypothetical protein 48 GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 786227..787324 GB:FROM 786227 GB:TO 787324 GB:DIRECTION + GB:PRODUCT Conserved hypothetical protein 48 GB:PROTEIN_ID AAZ54721.1 GB:DB_XREF GI:71914819 InterPro:IPR004383 LENGTH 365 SQ:AASEQ MPAELTFVAPRRTPPPRHLADLDPQERRDAVAELGEKPFRARQLAQHYFGRLEADTARMTDLPAASRERLGEALLPQLLTPVKHVTCDNGMTRKTLWRAFDGVLVESVLMRYPDRVTLCVSSQAGCGMNCPFCATGQAGLTRNLSTAEIVDQVVSSARDLARGTVAGGPGRISNIVFMGMGEPLANYKRVLAAIRRITDPVPDGLGISQRGITVSTVGLVPAIEKLTAERMQVRLAVSLHAPDDELRDELVPVNHRWKVAEVLDAAWRYADTTGRRVSIEYALIRDINDQAWRADLLGRLVAGRLAHVNLIPLNPTPGSKWTASRPEVEREFVRRLRSHGVSVTVRDTRGREIDGACGQLAASGA GT:EXON 1|1-365:0| SW:ID RLMN_THEFY SW:DE RecName: Full=Ribosomal RNA large subunit methyltransferase N; EC=2.1.1.-;AltName: Full=23S rRNA m2A2503 methyltransferase; SW:GN Name=rlmN; OrderedLocusNames=Tfu_0683; SW:KW 4Fe-4S; Complete proteome; Cytoplasm; Iron; Iron-sulfur;Metal-binding; Methyltransferase; rRNA processing;S-adenosyl-L-methionine; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->365|RLMN_THEFY|0.0|100.0|365/365| GO:SWS:NREP 7 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0008168|"GO:methyltransferase activity"|Methyltransferase| GO:SWS GO:0006364|"GO:rRNA processing"|rRNA processing| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| RP:PDB:NREP 1 RP:PDB:REP 26->362|2a5hA|5e-25|13.8|311/400| RP:PFM:NREP 1 RP:PFM:REP 125->265|PF04055|1e-06|37.2|121/164|Radical_SAM| HM:PFM:NREP 2 HM:PFM:REP 121->292|PF04055|5.3e-13|23.8|151/166|Radical_SAM| HM:PFM:REP 302->357|PF04234|0.00015|30.4|56/121|CopC| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 175->302|1tjnA|4e-07|9.0|111/125|c.92.1.3| HM:SCP:REP 115->350|1tv8A_|1.3e-13|20.6|214/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 977 OP:NHOMOORG 833 OP:PATTERN -------------------------------------------------------------------1 111111111111111-111-11--1121121111111111111111111------11---1111111111111111111111121222111111111--11111111111--------------21111111111111111---11111111111111111111111111111111111111111111111112111111111111111211111111111111211111122111111111111111111111----------------------1111111111111111111111111111111111111121111111111111222222212111111111211111111111111111111111-11112111111111111111111121111111111111-1111111111111111111111111111111111111111111111111111111------------------------------111112111111111111111111111111111111111111122111111121111211121111111111122211211111111111111111111122223311111111111111111111111111111111111111111111111111111112111--1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111-111111111111111112111111111-111111111111112122221111211112111111111111111111111111111111111111211111111111111--------111------------------1-----12111111211131 1111111-1---112----------------------------------------------------------------------------------------111--A1-----------------------------------------------------------------1544Q444334365-424412115 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 340 STR:RPRED 93.2 SQ:SECSTR #########################HHHHHcTTccHHHHTcHHHHHHTccccHHHHHTTccccHHHHHHHHTcTTcccccHHHHTTccTTcTTcHHHHHHcccGGGGcccTTccccTTcEEEEEEcccccTTcTTTTTTTccccccHHHHHHHHHHHTcTHHHHTccccTTccEEEEEEccTTcccHHHHHHHHHHHHTTTccEEEEEccHHHHcGGGccHHHGGccHHHHHHHTTccHHHGGGccEEEEEccccGGGccHHHHHHHHHHHHTTccEEEEEEccTTTTccHHHHHHHHHHHHTTEEEEEEEcccccTTcGGGcccHHHHHHHHHTTcTTcccGGGccEEEEEETTTTEEEEcHTT DISOP:02AL 1-2, 7-16, 363-365| PSIPRED cccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHcccccccEEEEEEEcccccEEEEEEEEccccEEEEEEEEEcccEEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHcccHHHccccccEEEEEcccHHHHHHHHHHccccEEEEEEEcccHHHHHHHccccccccHHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHHHHHHHcccEEEEcccccccHHHHHccHHHccc //