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Thermobifida fusca YX (tfus0)
Gene : AAZ54795.1
DDBJ      :             regulatory protein, LuxR:TPR repeat
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  85/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.118.8a.4.5a.4.6b.57.1c.37.1
:799 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   462->601 3gw4B PDBj 4e-04 26.5 %
:BLT:PDB   744->792 1fseE PDBj 2e-07 49.0 %
:RPS:PDB   36->357 2a5yB PDBj 1e-15 9.2 %
:RPS:PDB   468->665 3edtH PDBj 5e-14 22.7 %
:RPS:PDB   744->796 3cloA PDBj 4e-12 35.8 %
:RPS:SCOP  119->260 1cmvA  b.57.1.1 * 3e-04 15.9 %
:RPS:SCOP  258->346 1bjaA  a.4.5.9 * 2e-11 14.1 %
:RPS:SCOP  495->683 1hz4A  a.118.8.2 * 2e-16 18.2 %
:RPS:SCOP  744->796 1a04A1  a.4.6.2 * 1e-12 45.3 %
:HMM:SCOP  1->209 1w5sA2 c.37.1.20 * 6.6e-17 22.1 %
:HMM:SCOP  325->561 2ff4A2 a.118.8.3 * 2.5e-05 29.2 %
:HMM:SCOP  476->681 1qqeA_ a.118.8.1 * 2.1e-21 23.3 %
:HMM:SCOP  721->800 1p4wA_ a.4.6.2 * 1.9e-17 41.2 %
:RPS:PFM   37->95 PF00931 * NB-ARC 7e-04 35.6 %
:RPS:PFM   744->793 PF00196 * GerE 1e-09 54.0 %
:HMM:PFM   741->796 PF00196 * GerE 2.3e-19 44.6 56/58  
:HMM:PFM   537->561 PF07719 * TPR_2 1.2e-05 36.0 25/34  
:HMM:PFM   575->601 PF07719 * TPR_2 6.4e-05 29.6 27/34  
:HMM:PFM   613->643 PF07719 * TPR_2 0.00042 22.6 31/34  
:HMM:PFM   37->283 PF00931 * NB-ARC 2.4e-11 26.0 231/285  
:BLT:SWISS 36->553,744->793 Y914_MYCBO 8e-67 35.9 %
:BLT:SWISS 578->650 TTC7A_HUMAN 2e-04 34.3 %
:PROS 757->784|PS00622|HTH_LUXR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54795.1 GT:GENE AAZ54795.1 GT:PRODUCT regulatory protein, LuxR:TPR repeat GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(894069..896468) GB:FROM 894069 GB:TO 896468 GB:DIRECTION - GB:PRODUCT regulatory protein, LuxR:TPR repeat GB:PROTEIN_ID AAZ54795.1 GB:DB_XREF GI:71914893 InterPro:IPR000767 InterPro:IPR000792 InterPro:IPR001440 LENGTH 799 SQ:AASEQ MATNTTQVQQNLPLELDSFVGRARDLDAILRLLGVHRVVTLCGMGGIGKTRLALRAAAQAVDRFSDGVWLCEMSETTTREAVAARIACVLGVRSDHECAPDQVLVDLLRSRRLLLVLDNCEHAVQHVASVIEQLLPRCPNVSFLVTSREPLHIEGEALWRVPPLTVPDPGHGDPLEAESVQLFVDRARAHAHDFTVTPERLEAIATICRRLDGIPLGIELAAARVRLLSVAQIAERLRDRFTMLTYGDRNAPVRQRTLRAVLDWSYDMLDEPERRLLRRLSVFSDWDLDLAERVCADESLPAHCLLDLMVSLVDRSLVTVVGEVQGRMRYRMLDTIRQYALARLAESGEETRLRLRHREQVLALAEELAHYAVAGYGVSWEQRFSAFQRVCAERDNVRTALTWSAERGDVVEGLRLCVALRPYWMVNGLLAEGAYWTDRFLAMDCADETLRGQAMVRRAELAWDRADPSHAVTIGEEGLRLCQQAGDHGSVALGLNILAMSDIRAGRFDRAEQRLAESVTLTRATDDPWNEGIARSTQGALAARQGRWEEARDRYEEALTLLRTIDHWWGVGITLIGRGRVAEASGDLRGAERCFREALDIQRMIGGPPELARCLAGVGRVLASQGKVAEAYRCLQESLTLCHNTGQRLGTARGLLAIAKVALAEGRADEATRLAGAADALRERSGHPAPRKKWPLQGGTFTLRWEEGRRMDSDEAVCAAVQVAEAGAASDAAPLLDADEAVLTPREREVAELIGQGMSNRSIAERLFISPATVARHVANINTKLGFTSRNQIAAWINR GT:EXON 1|1-799:0| BL:SWS:NREP 2 BL:SWS:REP 36->553,744->793|Y914_MYCBO|8e-67|35.9|546/882| BL:SWS:REP 578->650|TTC7A_HUMAN|2e-04|34.3|67/858| PROS 757->784|PS00622|HTH_LUXR_1|PDOC00542| SEG 22->33|rardldailrll| SEG 101->118|dqvlvdllrsrrlllvld| SEG 220->231|laaarvrllsva| SEG 274->280|rrllrrl| SEG 714->743|deavcaavqvaeagaasdaaplldadeavl| BL:PDB:NREP 2 BL:PDB:REP 462->601|3gw4B|4e-04|26.5|136/192| BL:PDB:REP 744->792|1fseE|2e-07|49.0|49/64| RP:PDB:NREP 3 RP:PDB:REP 36->357|2a5yB|1e-15|9.2|315/501| RP:PDB:REP 468->665|3edtH|5e-14|22.7|194/254| RP:PDB:REP 744->796|3cloA|4e-12|35.8|53/249| RP:PFM:NREP 2 RP:PFM:REP 37->95|PF00931|7e-04|35.6|59/241|NB-ARC| RP:PFM:REP 744->793|PF00196|1e-09|54.0|50/57|GerE| HM:PFM:NREP 5 HM:PFM:REP 741->796|PF00196|2.3e-19|44.6|56/58|GerE| HM:PFM:REP 537->561|PF07719|1.2e-05|36.0|25/34|TPR_2| HM:PFM:REP 575->601|PF07719|6.4e-05|29.6|27/34|TPR_2| HM:PFM:REP 613->643|PF07719|0.00042|22.6|31/34|TPR_2| HM:PFM:REP 37->283|PF00931|2.4e-11|26.0|231/285|NB-ARC| GO:PFM:NREP 6 GO:PFM GO:0005524|"GO:ATP binding"|PF00931|IPR002182| GO:PFM GO:0006915|"GO:apoptosis"|PF00931|IPR002182| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 4 RP:SCP:REP 119->260|1cmvA|3e-04|15.9|138/197|b.57.1.1| RP:SCP:REP 258->346|1bjaA|2e-11|14.1|85/95|a.4.5.9| RP:SCP:REP 495->683|1hz4A|2e-16|18.2|187/366|a.118.8.2| RP:SCP:REP 744->796|1a04A1|1e-12|45.3|53/67|a.4.6.2| HM:SCP:REP 1->209|1w5sA2|6.6e-17|22.1|204/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 325->561|2ff4A2|2.5e-05|29.2|130/0|a.118.8.3|1/2|TPR-like| HM:SCP:REP 476->681|1qqeA_|2.1e-21|23.3|206/290|a.118.8.1|1/1|TPR-like| HM:SCP:REP 721->800|1p4wA_|1.9e-17|41.2|80/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 324 OP:NHOMOORG 91 OP:PATTERN --------------------------------------------1---1-11---------------- ----5------------55-5-118-5555532---33MG-52612--1--1--------441-33E5493-----------1----------------------------------------------1----3-43311---M-1-1--12-----------1-21153------------4------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------18-1-----------------------------2------1-15211------------------------------------------------------------------------333-322------34------132------------------4-------------------------------------------------1-13--------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------42-------1-------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------2----------------------------------------------------------------------------------F------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 729 STR:RPRED 91.2 SQ:SECSTR ###################################cEEEEEEccTTccHHHHHHHHHHHcccTcTTTccEEEcccccTTHHHHHHHHHHHHHTTTcccTTccccTTccHHHHHHHHHHHHTTcTTEEEEEEEEccHHHHHHHHHTTcEEEEEEccGGGGGGccccEEEEEcccccHHHHHHHHHHTccccccHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHTTcccccHHHHHHHHHHHHHHcccTTcccccccccHHHHHHHHHHTccHHHHHHTTGGGccTTccEEHHHHHHccccccTHHHHHHHHHTTTccccEcEEEcccccEEEccHHHHHHHHTTccTHHHHHHHTTcTTccHHHHHTTTcHHHHHHH##TTTcccccHHHHHHHHHHHTccHHHHHHHTTccccHHHHHHHHHHHHHHcGGGHHHHHHHHGGGTTTcHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHcHHcccccccccHHHHHHHTTEEEEEEEETTEEEEEETcccTTccEEEHHHHHHHTTcccGGGG#################################cHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccHHHHHHHTTc DISOP:02AL 1-5, 8-10, 92-99| PSIPRED ccccccccccccccccccccccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccccccHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHc //