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Thermobifida fusca YX (tfus0)
Gene : AAZ54845.1
DDBJ      :             amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  694/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:327 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   126->240 3dhwA PDBj 4e-05 24.0 %
:RPS:PDB   198->239 3dhwA PDBj 2e-10 31.6 %
:RPS:SCOP  111->308 2r6gG1  f.58.1.1 * 9e-20 14.1 %
:HMM:PFM   103->297 PF00528 * BPD_transp_1 2.1e-20 19.4 175/185  
:BLT:SWISS 63->297 GLUD_CORGL 3e-41 40.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54845.1 GT:GENE AAZ54845.1 GT:PRODUCT amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(954451..955434) GB:FROM 954451 GB:TO 955434 GB:DIRECTION - GB:PRODUCT amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine GB:PROTEIN_ID AAZ54845.1 GB:DB_XREF GI:71914943 InterPro:IPR010065 LENGTH 327 SQ:AASEQ MSAQQVLFDIPGPKARIRHAVYTVLTLVGFFVVLAIIYLGFNRSLGEGAPPLFSAEAWAVNPNGQWAAVRWQPFIDPATWTDYVIPGLLNTLTAALWAAVLALVFGLVFGIARLSDHAWIRIPAGAVVEFFRGIPLLMLIFFAMALPLAVNQVRPLLGLPPLQPGTFQVSALAAVVIGLTLYNGSVLAEVFRAGINAVPKGQSEAAYSLGMNKVQVMWWILIPQAVRSMMPAIVAQLVILLKDTALGYIIAFPELLRSFSLIGTRYGNVIPAALICAVIYIAINISLSRLAIWLEKRNARSSKGGTKGTALPTTAASGTFGAPGSTT GT:EXON 1|1-327:0| BL:SWS:NREP 1 BL:SWS:REP 63->297|GLUD_CORGL|3e-41|40.8|223/273| TM:NTM 7 TM:REGION 20->42| TM:REGION 89->111| TM:REGION 125->147| TM:REGION 172->194| TM:REGION 215->237| TM:REGION 241->263| TM:REGION 270->292| SEG 21->34|vytvltlvgffvvl| SEG 87->110|gllntltaalwaavlalvfglvfg| SEG 155->165|pllglpplqpg| BL:PDB:NREP 1 BL:PDB:REP 126->240|3dhwA|4e-05|24.0|100/203| RP:PDB:NREP 1 RP:PDB:REP 198->239|3dhwA|2e-10|31.6|38/203| HM:PFM:NREP 1 HM:PFM:REP 103->297|PF00528|2.1e-20|19.4|175/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 111->308|2r6gG1|9e-20|14.1|184/284|f.58.1.1| OP:NHOMO 4139 OP:NHOMOORG 728 OP:PATTERN 11--12----------1-1111114--11-2211----1122--2222--1-1----2------2--- ----4212222221411----6--1C------766626C914125173533-769125--222-577A5A3744476621421---------------------------11111111111111-----1--4---222441111-22342233322----1--1--3322-2112--2212-1241111--26455555875566556623397556333744355555396222222222222222222236657A9865676655993757C533388886664AA888777887876666566666666758A9888881344656454552323422233331221423319A-4132-1111111161--11125423322J46222412222375347567P-22C22918CI22hQQNQTOUTfKKN9---25E456635B1111111134511-49----------111111111111111--1-4--21-6HFBGJLLJMH98CCCFFHODCDDACFEY76841297B94743B9DFJM244----A33322222---24-11K-997C46BAAA42-23-3----------6-3341555553221111111-13----68A-2-----A-1111--11111111-11-1---1--------99JH5AB8888886887-8898888888888788779GKELJ5558676877888888868C777777712A9AAAA99AAAA--3-111111111--66F33342323223233155555-64554-GEDGFNJP8EHBD5LIJ----------566988888AA88811---------------2----------------32-3----------------------132-115111--1 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1------6-----------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 100 STR:RPRED 30.6 SQ:SECSTR #############################################################################################################################HHHHHHHHccHHHHHHHHHHHHHHTTcccc###############cHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHH####################################################################################### DISOP:02AL 1-3, 297-327| PSIPRED cccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHcccccccccc //