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Thermobifida fusca YX (tfus0)
Gene : AAZ54858.1
DDBJ      :             Small GTP-binding protein domain
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  801/915 : Eukaryota  67/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:493 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   93->394 2qtfA PDBj 2e-22 36.5 %
:RPS:PDB   96->440 2e87A PDBj 1e-29 18.7 %
:RPS:SCOP  275->458 1wdtA2  c.37.1.8 * 2e-17 15.6 %
:HMM:SCOP  272->484 1wxqA1 c.37.1.8 * 6.7e-49 31.1 %
:RPS:PFM   275->446 PF02421 * FeoB_N 1e-08 30.9 %
:HMM:PFM   283->392 PF01926 * MMR_HSR1 2.3e-26 35.5 107/108  
:HMM:PFM   265->293 PF02263 * GBP 0.00034 37.9 29/260  
:HMM:PFM   421->455 PF08323 * Glyco_transf_5 0.0008 29.4 34/241  
:BLT:SWISS 74->472 HFLX_ECOLI 5e-75 43.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54858.1 GT:GENE AAZ54858.1 GT:PRODUCT Small GTP-binding protein domain GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 970370..971851 GB:FROM 970370 GB:TO 971851 GB:DIRECTION + GB:PRODUCT Small GTP-binding protein domain GB:PROTEIN_ID AAZ54858.1 GB:DB_XREF GI:71914956 InterPro:IPR002114 InterPro:IPR005225 InterPro:IPR006073 LENGTH 493 SQ:AASEQ MDMTRTSLNLNDHTLRTGSSVDTEDSVPAHFDGIDTTTPGEAELQDRLALRRVNGLSTELHDITEVEYRSLRLERVVLIGVWTSGTQEDADNSLFELKQLAETAGAVVLAGLTQRRSKPDPATYIGSGKAAELRDIVEATGADTVICDGELTPGQLRQLEEAVKVKVIDRTALILDIFAQHARSREGKAQVELAQLTYLLPRLRGWGEALSRQTGTSGGGNGGVGLRGPGETKLETDRRRIHRRMAKLRRELAHMAVAREVKRDRRRSRKVPAVAIAGYTNAGKSSLLNRITGAGVLVEDALFATLDPTVRRARTPDGRLFTLSDTVGFVRHLPHQLVEAFRSTLEEVTEADLILHVVDGSHPDPEQQIASVRQVFAEIDATDIPELIVINKIDAADETQLRQLRTKYPGMVEVSARTGEGIGELLQAIAEALPESEHEVTVLLPYERGDLVSRIHQEGRILSEEHTASGTVLHAWVSPELAGQLDRYATVAS GT:EXON 1|1-493:0| BL:SWS:NREP 1 BL:SWS:REP 74->472|HFLX_ECOLI|5e-75|43.7|389/426| SEG 215->230|gtsgggnggvglrgpg| SEG 256->274|avarevkrdrrrsrkvpav| BL:PDB:NREP 1 BL:PDB:REP 93->394|2qtfA|2e-22|36.5|244/311| RP:PDB:NREP 1 RP:PDB:REP 96->440|2e87A|1e-29|18.7|327/353| RP:PFM:NREP 1 RP:PFM:REP 275->446|PF02421|1e-08|30.9|162/188|FeoB_N| HM:PFM:NREP 3 HM:PFM:REP 283->392|PF01926|2.3e-26|35.5|107/108|MMR_HSR1| HM:PFM:REP 265->293|PF02263|0.00034|37.9|29/260|GBP| HM:PFM:REP 421->455|PF08323|0.0008|29.4|34/241|Glyco_transf_5| GO:PFM:NREP 4 GO:PFM GO:0005525|"GO:GTP binding"|PF02421|IPR011619| GO:PFM GO:0015093|"GO:ferrous iron transmembrane transporter activity"|PF02421|IPR011619| GO:PFM GO:0015684|"GO:ferrous iron transport"|PF02421|IPR011619| GO:PFM GO:0016021|"GO:integral to membrane"|PF02421|IPR011619| RP:SCP:NREP 1 RP:SCP:REP 275->458|1wdtA2|2e-17|15.6|180/267|c.37.1.8| HM:SCP:REP 272->484|1wxqA1|6.7e-49|31.1|212/0|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1324 OP:NHOMOORG 915 OP:PATTERN 11111111111111111111111-12211111---11------------111111111111-----11 2221111111111111111-12111111111111111111122211111221111111--2211121111211111111-21131222111111221--111112111211111111111111112132121211111122222133212222221111112212221121-1-----1--1-221111113223232333333333332222223332221221333333211222222122222222112111221123112112211121222111111111111111111111111111111111111111111111111221111111111112222211121112122242233321322332121-221111121111112221222222211111111111-22142122311-3111221111212122111111111111111111122211112------------111-11-11-11------1111112221212322111111111111111211-112-111111111111111111312331111111121132333313122121111-12212212233334323-------------------------111112122122231111212111111111111-21111------11211112222222222-2222222222222222222111212211111111111111111122222221-22222222222211-1222222112122111111111-1-1133211111111111111111111111111111111111111122222222211211111111111111111-11111111--------1-1-------------------------1122121212111 11----1-1---------------------------------------------------------------------------------------------------3-2131311--11---12--2483--32--1-12----11----11111131111211-211-112112227111221112-2311----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 387 STR:RPRED 78.5 SQ:SECSTR ############################################################################################EEEcTTTTcccccHHHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHHHEEcccccHHcTHHHHHHHHHHHHHHcccGGGccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcHHccHcHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHGGGcccccccccEEEEEccTTccHHHHHHHHcccccEEEccTTccccEEEEEEEETTEEEEEEEcTTTcccccTTccHHHHHHHHGGGGTccEEEEEEcTcTTcccHHHHHHHHHHHHHHTTTccEEEEEccTTTccHHHHHHHHHTTcccEEccTTTTcTHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHTTTccccccEEEEEETTT############## DISOP:02AL 1-3, 22-25, 66-68, 209-218, 256-267, 492-493| PSIPRED cccccEEEEHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHcccHHHccccEEEEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEEEEEcccccccEEEEcccHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHccEEEEHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHccccEEEccccccccccEEEEEEccccEEEEEEcccccccccHHHHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHccHHHHEEEHHccEEEEEEEcHHHHHHHHHHHHHcc //