[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ54900.1
DDBJ      :             HylII
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  551/915 : Eukaryota  26/199 : Viruses  0/175   --->[See Alignment]
:366 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   34->147 PF10446 * DUF2457 2e-04 29.9 %
:RPS:PFM   191->352 PF03006 * HlyIII 2e-15 40.6 %
:HMM:PFM   156->352 PF03006 * HlyIII 2.5e-45 33.5 197/221  
:BLT:SWISS 78->104 LPHN3_RAT 4e-04 48.1 %
:BLT:SWISS 117->353 Y1114_MYCBO 2e-37 42.5 %
:PROS 283->297|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54900.1 GT:GENE AAZ54900.1 GT:PRODUCT HylII GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1014941..1016041) GB:FROM 1014941 GB:TO 1016041 GB:DIRECTION - GB:PRODUCT HylII GB:PROTEIN_ID AAZ54900.1 GB:DB_XREF GI:71914998 InterPro:IPR003439 InterPro:IPR005744 LENGTH 366 SQ:AASEQ MARLYPTLSSNFVQHTPYLSVFAGHRHSNGINQWSIRFVPVQGTISARSTRERPAKHEIKRDLDHSPDRGGENWSTPPDISPEMCPAPHRYRQVTYECVSYAPEAMPLGAHEGEVAQKNVAAQPENRPPAERPHPSPTPLTRVEAAAAHLLHSAKPRLRGWLHLGTAPLALIAGIILIGFAPTTAARLASAIYGLSAVLLFSTSAAYHIGRWSPRTAAALRRLDHANIYLIIAGTYTPFVLLVLDGTQRTAMLALIWGCAAAGVLFTLVWLHAPRWLSTTLYVALGWIAVLFLPDLIRGVAAVPLLLVLTGGILYSLGALVYALKRPDPFPRWFGFHEIFHVLTIAAFACQYIAVFAVVTAAAPAQ GT:EXON 1|1-366:0| BL:SWS:NREP 2 BL:SWS:REP 78->104|LPHN3_RAT|4e-04|48.1|27/1550| BL:SWS:REP 117->353|Y1114_MYCBO|2e-37|42.5|228/242| PROS 283->297|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 7 TM:REGION 161->183| TM:REGION 187->209| TM:REGION 224->246| TM:REGION 250->272| TM:REGION 277->299| TM:REGION 303->324| TM:REGION 339->361| SEG 164->181|lgtaplaliagiiligfa| SEG 354->365|avfavvtaaapa| RP:PFM:NREP 2 RP:PFM:REP 34->147|PF10446|2e-04|29.9|107/455|DUF2457| RP:PFM:REP 191->352|PF03006|2e-15|40.6|160/221|HlyIII| HM:PFM:NREP 1 HM:PFM:REP 156->352|PF03006|2.5e-45|33.5|197/221|HlyIII| GO:PFM:NREP 1 GO:PFM GO:0016021|"GO:integral to membrane"|PF03006|IPR004254| OP:NHOMO 636 OP:NHOMOORG 577 OP:PATTERN -------------------------------------------------------------------- -1--111111111111111-12--1111111112221111-11111111111111111--111111121111222222-111------1111-1---------11---1---------------1---------1-111--1111--------------------------------------11111--1-11222222221222222111111222---1212111111-1111111111111111111111111111111111111-1-111111111111111111111111111111111111111111111111111-11212221222121-111122211----11--1111-1---------111-11111-------1111-111-1111111111111-11111-11-1--1111111111-1------1-1111------------------1----------------------------------------1111111111-11111111-1111-1-1--11--11---1112-1-11---111111-11-11--12-2-1111--1111-1-1------11212--1------------------------11111-11-111111111111111111111111---1-1-------11111111111111111-111111111111111111111111---1111111111111111111111111-111111111111---1----------1111---------------1111111---1-11111111-11111111---------1111-111111111111222222221111---111----1--111-111--------------------------111-1-----12- 1-----------------------------------------------------------------------------------------------1-1-----1-1--1-2--2----------------------------------------11--11111----1---1----------11-------2211111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 46-62, 127-140, 365-366| PSIPRED cccccccHHccHHHHccHHHHHccccccccccEEEEEEEEEcccccccHHHcccHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEccccccccccccHHHHHHHccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccc //