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Thermobifida fusca YX (tfus0)
Gene : AAZ54952.1
DDBJ      :             ABC-type oligopeptide transport system ATPase component
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  898/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:310 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   1->252 3dhwC PDBj 6e-23 29.3 %
:RPS:PDB   2->246 3b5jA PDBj 2e-38 21.6 %
:RPS:SCOP  1->255 1b0uA  c.37.1.12 * 2e-39 25.5 %
:HMM:SCOP  1->250 1g2912 c.37.1.12 * 1.9e-56 38.4 %
:RPS:PFM   48->154 PF00005 * ABC_tran 9e-07 35.7 %
:RPS:PFM   229->264 PF08352 * oligo_HPY 5e-07 50.0 %
:HMM:PFM   48->176 PF00005 * ABC_tran 3.9e-14 33.0 115/118  
:HMM:PFM   229->277 PF08352 * oligo_HPY 3.4e-12 37.0 46/64  
:HMM:PFM   28->55 PF03193 * DUF258 0.00063 33.3 27/161  
:BLT:SWISS 19->301 OPPF_BACSU 3e-43 34.3 %
:PROS 151->165|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54952.1 GT:GENE AAZ54952.1 GT:PRODUCT ABC-type oligopeptide transport system ATPase component GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1075935..1076867 GB:FROM 1075935 GB:TO 1076867 GB:DIRECTION + GB:PRODUCT ABC-type oligopeptide transport system ATPase component GB:PROTEIN_ID AAZ54952.1 GB:DB_XREF GI:71915050 InterPro:IPR001687 InterPro:IPR003439 InterPro:IPR003593 LENGTH 310 SQ:AASEQ MLKFDRVTKVYKVGAFGGGEFTAVRDASFEVRPGEVVSLIGESGSGKSTLGKMALRIASVSKGKITCDGIDVSTLRGHRALKDYYRKVQGVFQDPFSSYNPIFKADRVFSMIREEYYPEVSQSEWQDRVAEALKVVRLDPNQVLGKYPHQLSGGQLQRMLLARALLLDIDYLVADEVISMLDASTRIDVLNLLADLKARGMGILFVTHDLALGNYISDQTVILYKGEIVERGVTEKVFSDPRHPYTKKLFASVPQFHKKWEEVEAELRAKEAADTSTHPYHLEEGQEVPSELVQVSEGHYVQPFHRRAAV GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 19->301|OPPF_BACSU|3e-43|34.3|274/305| PROS 151->165|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 155->167|qlqrmllaralll| BL:PDB:NREP 1 BL:PDB:REP 1->252|3dhwC|6e-23|29.3|242/343| RP:PDB:NREP 1 RP:PDB:REP 2->246|3b5jA|2e-38|21.6|232/243| RP:PFM:NREP 2 RP:PFM:REP 48->154|PF00005|9e-07|35.7|98/123|ABC_tran| RP:PFM:REP 229->264|PF08352|5e-07|50.0|36/64|oligo_HPY| HM:PFM:NREP 3 HM:PFM:REP 48->176|PF00005|3.9e-14|33.0|115/118|ABC_tran| HM:PFM:REP 229->277|PF08352|3.4e-12|37.0|46/64|oligo_HPY| HM:PFM:REP 28->55|PF03193|0.00063|33.3|27/161|DUF258| GO:PFM:NREP 5 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0000166|"GO:nucleotide binding"|PF08352|IPR013563| GO:PFM GO:0005524|"GO:ATP binding"|PF08352|IPR013563| GO:PFM GO:0015833|"GO:peptide transport"|PF08352|IPR013563| RP:SCP:NREP 1 RP:SCP:REP 1->255|1b0uA|2e-39|25.5|247/258|c.37.1.12| HM:SCP:REP 1->250|1g2912|1.9e-56|38.4|237/240|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 23061 OP:NHOMOORG 1141 OP:PATTERN KKE5HBA8KLKKJIKDRABCBA8COCDVNDOAB86784AAB95EFFMUAH*lX7NRJIGCFCD8F154 CCIAjHDJPPPEHBGCCEE-EF44EhEDEEEBPONPIahl7PDVNbSHJMHESSSA8J33MMFGYMYbVjGHGGGPGHGCaLI34779HHEC1B8AA--47D7D9CCC9A455555577777777BF9EJE7ABCDJOORP675TCMJORMKMNMGGB4A5B5HMGNXXRD6A6756784985EAIBBYY6ENWnosmshuycrstklwuibbjawsrQHQrfPSSUUUUT**KRRRRRRPRSRRRRRORPJLYSKOYZMFLLPUVFFaYLHGJNQQPOSRSVZUYQYWSUUTQQTUSSULLLLLMPONNMLMbPNNLPQQQWNqTgcXZXdacbMgPObbbFMLIeWPaPXHLB7w*YMCJPXCHSQVJBTLDAEE998DGDFFGD***GAQiYTeRhkhjkjlcdh*-ONlMJfLh**B5*************a797Yn*odloiklBBBBBBBBFFH98CBb444354442222--11---1----13443873896cnhUifknpojUTTTPeep*VVUTHVmf*TRfS49PPKQOQIJcUug**COH6IACMG9988888EDCBCHHLiCKGQODHQHGO7KGHDGERFFCFADMJHP688B6879B875455555555G78578SWV8SALBFBXDGIIH9HIFEEGFHHDHJL2-57C9A11-111eZ**KiaWZZbXbZbWX-YWVWaZbWXWYaYUVVUUXqxuttLMMTVQTTTTTTTTSTSTTpVTRWWVWH2gbbcccbcaddd129A554468AB878kUtPOOJJLEIGHIKEHLDEEDE7E9CHLFNOONTgcnVbaVTKrpm7754476477QaYbVVVVVdebfg78A57557779888233HCCBB9A54354454W5I77964-64878846775A6695333IMUJFZiZZX6IA 1---263-22-112342433243447555433375524433442223442436323723232223-32-321132121-1122122-2-23223122211211132--17C225531-2-12537514-BQ3-23321--51447-321-421D-625F--729541233LBF823222J231-3666N2C642A4A62 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 255-272| PSIPRED cEEEEccEEEEEcccccccEEEEEEcccEEEccccEEEEEEEccccHHHHHHHHHHcccccccEEEEccEEcccccHHHHHHHHHHHccEEEcccHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHcccccccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccEEEEEcccHHHHHHHHHHHHHHHccEEEEEccHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccHHccccccccEEEccccEEEEEcHHHcc //