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Thermobifida fusca YX (tfus0)
Gene : AAZ54970.1
DDBJ      :             putative ABC transporter permease protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  508/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:227 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->167 3dhwA PDBj 5e-28 43.8 %
:RPS:PDB   123->195 3dhwA PDBj 2e-21 49.3 %
:RPS:SCOP  17->191 3dhwA1  f.58.1.1 * 1e-17 41.7 %
:RPS:PFM   101->165 PF00528 * BPD_transp_1 4e-07 36.9 %
:HMM:PFM   44->225 PF00528 * BPD_transp_1 8.1e-25 30.1 176/185  
:BLT:SWISS 23->195 METI_VIBCH 3e-37 53.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54970.1 GT:GENE AAZ54970.1 GT:PRODUCT putative ABC transporter permease protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1096928..1097611 GB:FROM 1096928 GB:TO 1097611 GB:DIRECTION + GB:PRODUCT putative ABC transporter permease protein GB:PROTEIN_ID AAZ54970.1 GB:DB_XREF GI:71915068 LENGTH 227 SQ:AASEQ MTGWLDGLVERWPQMGPNLWWGTLDTLYMVGWSTFFTALFGLPLGVLLVTTDERGLTPAPAVRALLSAVVNVGRSLPFIVLMVAVLSLTRLLTGTTLGPTAAIVPLSIGAIPFYARLVETALREVGRDVVDAAQAMGARRIVIVGKVLLPEALPGLIAGLVMTVVTLVSYSAMAGAIGGGGLGDLAIRYGYQRFDDYYLWATVILLVLVVQVVQSVGDVLVRRVSHR GT:EXON 1|1-227:0| BL:SWS:NREP 1 BL:SWS:REP 23->195|METI_VIBCH|3e-37|53.2|173/225| TM:NTM 5 TM:REGION 30->52| TM:REGION 63->85| TM:REGION 96->118| TM:REGION 158->180| TM:REGION 200->221| SEG 86->100|lsltrlltgttlgpt| SEG 174->187|agaigggglgdlai| SEG 203->224|villvlvvqvvqsvgdvlvrrv| BL:PDB:NREP 1 BL:PDB:REP 22->167|3dhwA|5e-28|43.8|146/203| RP:PDB:NREP 1 RP:PDB:REP 123->195|3dhwA|2e-21|49.3|73/203| RP:PFM:NREP 1 RP:PFM:REP 101->165|PF00528|4e-07|36.9|65/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 44->225|PF00528|8.1e-25|30.1|176/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 17->191|3dhwA1|1e-17|41.7|175/203|f.58.1.1| OP:NHOMO 770 OP:NHOMOORG 510 OP:PATTERN -------------------------------------------------------------------- -----1111111-11----------2------1121112------11111111-1111------1--11111111----112-------------------1---------------11111111----------------------------------------------------------1-1------11333333332333333312211233112144322222223222222222222221122112111111-111321111121112---2222111111-----------11111111111111111111111-2112222222212--1221---111111----11-1-11-1-11-1-11---111-111-11-111---211-122222222223---1--1-1-1--21122243221111-----11211---11111111-11---13-----------------------------------122212222221222122212222113222122--111--1114-111--------11111111-----------1---1-1-----------------1----1111111111-1--------1-----211-1-----1--------------------------------33331311111111111-1111111111111111111343331112222222222222222211111111-433333333333--1-111111111---1-11111111-11111122222221111-33333342223221222111111111-1221111111121111111111111111---1---------------1--------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------8-----------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 179 STR:RPRED 78.9 SQ:SECSTR ################HHHHHHHHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHcccTTccHHHHHHHHHHHcccc################################ DISOP:02AL 226-227| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //