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Thermobifida fusca YX (tfus0)
Gene : AAZ54974.1
DDBJ      :             multiple sugar transport system permease protein
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  558/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:304 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   98->304 2r6gG PDBj 3e-13 29.1 %
:RPS:PDB   193->231 3dhwA PDBj 5e-10 35.9 %
:RPS:SCOP  38->304 2r6gG1  f.58.1.1 * 3e-27 21.2 %
:RPS:PFM   166->239 PF00528 * BPD_transp_1 1e-04 28.4 %
:HMM:PFM   120->294 PF00528 * BPD_transp_1 1.2e-22 21.8 170/185  
:BLT:SWISS 40->304 LACG_RHIRD 7e-32 33.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54974.1 GT:GENE AAZ54974.1 GT:PRODUCT multiple sugar transport system permease protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1101284..1102198 GB:FROM 1101284 GB:TO 1102198 GB:DIRECTION + GB:PRODUCT multiple sugar transport system permease protein GB:PROTEIN_ID AAZ54974.1 GB:DB_XREF GI:71915072 LENGTH 304 SQ:AASEQ MAATSTPSSPSVSAVPQSAKKRKRKNGGSIGMREATPLTYIGLSLTILLSVFPLWWMFVVASRDTAAASARPPYLWPGGNFLENLERLFANTTANFTLGLLNSTISATAVALSVVFFSSLAGFSLAKLRFKGRNVAAVGVVLTMAVPVQMGIIPLLMLMEWFGWRGQITAIIVPFMVSGFGVFMMRQYCIQAIPDELLEAARMDGCSTFRIYWNVVLPALRPAMVVLGLLTFMTQWNEFTWALAVLTPANPTVQIAINQLNQSAYSRDFALMFTGSVVATLPLLILFFVLGRQLIGRIMEGAIK GT:EXON 1|1-304:0| BL:SWS:NREP 1 BL:SWS:REP 40->304|LACG_RHIRD|7e-32|33.3|258/273| TM:NTM 6 TM:REGION 38->60| TM:REGION 100->122| TM:REGION 137->159| TM:REGION 164->186| TM:REGION 205->227| TM:REGION 269->291| SEG 2->19|aatstpsspsvsavpqsa| BL:PDB:NREP 1 BL:PDB:REP 98->304|2r6gG|3e-13|29.1|203/284| RP:PDB:NREP 1 RP:PDB:REP 193->231|3dhwA|5e-10|35.9|39/203| RP:PFM:NREP 1 RP:PFM:REP 166->239|PF00528|1e-04|28.4|74/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 120->294|PF00528|1.2e-22|21.8|170/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 38->304|2r6gG1|3e-27|21.2|264/284|f.58.1.1| OP:NHOMO 3081 OP:NHOMOORG 593 OP:PATTERN 22--4--12323332171212---61151-3-----------------------1241--1421---- ---1j213334-1123344-413348444443144414575337J*Z2DHF4QKN11B--867CD4EOXH57666GDA1---4-------------------------1---------------------------9BB78---66221311-11221122212221333--1-----1----CE255DE-953222222331132223SI994822354B29457787779*111111111111111-1---541122--22233--22---1-42452325344422666777766664333344443333355---5553G4-391111121514C2--1445e-26233E--231--2I--1665J2-1-------111112-A771--425424476467677C---5--4-18N--VUUIaXOkhdUQ22---8E86657C74--------2112--11-----------------------------1---2-133324665545233344894443324462223--1127-13232457C----1--3--------------1------1--11111---------22-124----------1------------------125-----1-5----------------------1---------26761413333333333-33333334333323333325656611123222222222222225-113332--488888888888---------11111-65C---211--------2----------1-22222222321222434--------------111113-54411111111111111---1---------------181-1-1--1-1111111---12----7KFB89S8A9-2- -------------2------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 219 STR:RPRED 72.0 SQ:SECSTR ##################################################################################HHHHHHHHTcccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcHHHHHHHHHTTccccccHHHHHHHHHHHHHTccTTcHHHHHHHHTTHHHHHHHHHHHTTccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHcccGGGcHHHHGGGcccccccHHHH###HHHHHTHHHHHHHHHHHTTTccccccTTTcc DISOP:02AL 1-2, 4-34| PSIPRED ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //