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Thermobifida fusca YX (tfus0)
Gene : AAZ54987.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  43/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:190 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->102 2qwtA PDBj 6e-06 31.1 %
:RPS:PDB   28->133 3br6A PDBj 1e-10 14.2 %
:RPS:SCOP  28->69 1z77A1  a.4.1.9 * 6e-09 16.7 %
:RPS:SCOP  79->133 1pb6A2  a.121.1.1 * 4e-04 12.7 %
:HMM:SCOP  1->84 1t33A1 a.4.1.9 * 1.4e-18 39.8 %
:HMM:SCOP  79->188 1vi0A2 a.121.1.1 * 2.1e-10 32.7 %
:HMM:PFM   12->58 PF00440 * TetR_N 6.7e-20 44.7 47/47  
:BLT:SWISS 28->107 YOBS_BACSU 2e-04 30.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54987.1 GT:GENE AAZ54987.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1117898..1118470 GB:FROM 1117898 GB:TO 1118470 GB:DIRECTION + GB:PRODUCT putative TetR-family transcriptional regulator GB:PROTEIN_ID AAZ54987.1 GB:DB_XREF GI:71915085 InterPro:IPR001647 LENGTH 190 SQ:AASEQ MRTRGGDRRAAILRAAAELFAARGFRSVSIEDLGRAVGTTGPALYRHFPGKEALLAEVLLDISERLLRQGTEHVAAHPDPNDALDALLRGHIAFALAEPALITVHDRELLHVPEEPRRKIRRLQRAYLEQWVDVLAAVRPTTPTPVLRTAVHATFGLLNSTPHSAGELDRDHLAELLFTMARTALLAAGK GT:EXON 1|1-190:0| BL:SWS:NREP 1 BL:SWS:REP 28->107|YOBS_BACSU|2e-04|30.4|79/191| SEG 4->26|rggdrraailraaaelfaargfr| SEG 134->151|vlaavrpttptpvlrtav| BL:PDB:NREP 1 BL:PDB:REP 28->102|2qwtA|6e-06|31.1|74/167| RP:PDB:NREP 1 RP:PDB:REP 28->133|3br6A|1e-10|14.2|106/185| HM:PFM:NREP 1 HM:PFM:REP 12->58|PF00440|6.7e-20|44.7|47/47|TetR_N| RP:SCP:NREP 2 RP:SCP:REP 28->69|1z77A1|6e-09|16.7|42/75|a.4.1.9| RP:SCP:REP 79->133|1pb6A2|4e-04|12.7|55/126|a.121.1.1| HM:SCP:REP 1->84|1t33A1|1.4e-18|39.8|83/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 79->188|1vi0A2|2.1e-10|32.7|110/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 61 OP:NHOMOORG 43 OP:PATTERN -------------------------------------------------------------------- -----1-----1--12211-14--1211111132221222-221---------11112--111-1211111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 163 STR:RPRED 85.8 SQ:SECSTR ##########################GccHHHHHHHTTccHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHTTHHHHHTTccccccHHHHHHHHHHHHHHHHccHH# DISOP:02AL 1-6| PSIPRED ccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccc //