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Thermobifida fusca YX (tfus0)
Gene : AAZ55038.1
DDBJ      :             probable phosphoesterase YhaO-putative DNA repair exonuclease
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  144/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.159.1
:416 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   56->249 3e0jC PDBj 2e-11 8.1 %
:RPS:SCOP  1->201 1su1A  d.159.1.7 * 6e-12 10.7 %
:HMM:SCOP  1->328 1ii7A_ d.159.1.4 * 1.4e-56 33.3 %
:HMM:PFM   1->198 PF00149 * Metallophos 4e-12 19.0 179/200  
:BLT:SWISS 56->238 MRE11_METTH 9e-09 28.0 %
:BLT:SWISS 312->383 GATB_RICRS 7e-04 35.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55038.1 GT:GENE AAZ55038.1 GT:PRODUCT probable phosphoesterase YhaO-putative DNA repair exonuclease GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1175505..1176755) GB:FROM 1175505 GB:TO 1176755 GB:DIRECTION - GB:PRODUCT probable phosphoesterase YhaO-putative DNA repair exonuclease GB:PROTEIN_ID AAZ55038.1 GB:DB_XREF GI:71915136 InterPro:IPR004843 LENGTH 416 SQ:AASEQ MKLLHAADLHIDSPLRGLSRYEGAPADQLRGATRQALENLVTLALEEEVTAVLLAGDIYDGDWPDYNTGLFFTRQMTRLCDAGIPVYLIAGNHDAANLMTRTLTASLPKNVHYFPTERPATVVDEQRGLAVHGQGFAQREVRANLAEHYPAPRSGLFNVGLLHTALTGREGHEPYAPCRIDQLVDHGYEYWALGHVHQRQVEYDADVKVVFPGNIQGRNVREAGPKGCTLVTVDDRHRVTGLRHHDLDTAARWHELRVDVRSARDVSDVLTLVSEQLDKELAGDTEPNRVHAVRVVVEGPTDAHEQLHRDHEKLLNELRAIAAQRPDTWLEKLRVKTSPPEERLDAAHADELVGELWRTAARLSASPEQLTEVIASAELLGKLPLQLREELSDPQRQRDLLAEAVELLAAELGGAQ GT:EXON 1|1-416:0| BL:SWS:NREP 2 BL:SWS:REP 56->238|MRE11_METTH|9e-09|28.0|182/587| BL:SWS:REP 312->383|GATB_RICRS|7e-04|35.7|70/483| SEG 36->55|alenlvtlaleeevtavlla| SEG 257->269|rvdvrsardvsdv| SEG 400->415|llaeavellaaelgga| RP:PDB:NREP 1 RP:PDB:REP 56->249|3e0jC|2e-11|8.1|186/409| HM:PFM:NREP 1 HM:PFM:REP 1->198|PF00149|4e-12|19.0|179/200|Metallophos| RP:SCP:NREP 1 RP:SCP:REP 1->201|1su1A|6e-12|10.7|178/184|d.159.1.7| HM:SCP:REP 1->328|1ii7A_|1.4e-56|33.3|297/333|d.159.1.4|1/1|Metallo-dependent phosphatases| OP:NHOMO 150 OP:NHOMOORG 150 OP:PATTERN ------------------------------11---------------1-111---------------- ----1--------------------------------------1--------------------1-----1---------11--------------------------1------------------1-----1-----------------------------------------------------------1111111111111111--1111111---11--11111111-11111111111111111111111--1-1111111--1-1111---------------------------------------------------1-------1-1-----111------------1---1------------1---------11---1---11-1-------------------1--1-1---111--111--------1111-1----------1-1--11---------------------------------1------1111111----11-1------11----------1-----1--1---1--------------------11--1111--1111----11-------11---------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 256 STR:RPRED 61.5 SQ:SECSTR cEEEEEcccccccTTcccTTTccHHHHHHHHHHHHHTTccccccEEEHTcccccccccccccHHHHHHHHHHHHHHHHHHHTTccEEEEccTTccHccccccccccccTTccHHHHTcTTEEEccccEEEEETTEEEEEcccHHHHHHHHHcccccHHHHHHHHHHcTcccTTcccccccTTcccccccEEEEEEEcccEEEEEEcccccEEEEEEEEcHHHccHcEEEEEETTTTEEEEEEEEEEcccccccccc################################################################################################################################################################ DISOP:02AL 343-345| PSIPRED cEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccEEEEccccEEEEEEcccEEEEEEccccHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccHHHHHcccccEEEEccccccEEEcccccEEEEcccccccccccccccEEEEEEEccccEEEEEEEEEccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHccccHHHHHHHHHHHHHHHHHHcccc //