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Thermobifida fusca YX (tfus0)
Gene : AAZ55056.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  59/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.160.1
:450 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   271->394 1zatA PDBj 1e-05 30.7 %
:RPS:SCOP  264->394 1zatA1  b.160.1.1 * 3e-20 26.7 %
:HMM:SCOP  264->395 1zatA1 b.160.1.1 * 9.6e-27 31.5 %
:HMM:PFM   269->394 PF03734 * YkuD 1.2e-16 26.9 108/116  
:BLT:SWISS 8->421 Y493_MYCBO 1e-53 35.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55056.1 GT:GENE AAZ55056.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1192486..1193838 GB:FROM 1192486 GB:TO 1193838 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ55056.1 GB:DB_XREF GI:71915154 LENGTH 450 SQ:AASEQ MEGRAIQAARRLGVGVTAASLLFTVACSGTEEASGVRNESPTAELTIVPANGETEVRPDTPITVTATRGTIEDVQVIQTPLPEEGSEASASPEAENTASDESEEGPSEVDTITGTLNEDKTEWVSDWTLIPGSTVTVVAKGKSPEGDVTEFTSEFTTLAATPGKRLEIQSNFPVSGDVVGVGMPVIINFDLPVENKAAVEAALEVISEKPTQGAWNWFGDQTVVFRTEEYWEPYQKVTVNMRLAGVQAAEGVYGVKNYQLNFEVGRSQISEVDNDTHRMIVTRDGEQIKDFPISNGKGTTRAYTTTSGIHLTMEKYQHLVMDSSTVGIPPGHPDYYRVDVNYAVRFSNSGEFTHAAPWNGSLGQANLSHGCINMSTEDARWFYENSYMGDPLIVVGTDRELEVDNGWGYWQRSWEEWLANSTLGEPDRTDEPGSPGRPHGTIGEQAEAAE GT:EXON 1|1-450:0| BL:SWS:NREP 1 BL:SWS:REP 8->421|Y493_MYCBO|1e-53|35.2|372/451| SEG 80->95|plpeegseasaspeae| BL:PDB:NREP 1 BL:PDB:REP 271->394|1zatA|1e-05|30.7|114/248| HM:PFM:NREP 1 HM:PFM:REP 269->394|PF03734|1.2e-16|26.9|108/116|YkuD| RP:SCP:NREP 1 RP:SCP:REP 264->394|1zatA1|3e-20|26.7|120/126|b.160.1.1| HM:SCP:REP 264->395|1zatA1|9.6e-27|31.5|124/0|b.160.1.1|1/1|L,D-transpeptidase catalytic domain-like| OP:NHOMO 212 OP:NHOMOORG 59 OP:PATTERN -------------------------------------------------------------------- ----511111111156655-5E44565555549699448711111-------1121-1--32112239551-----------------------------------------------------------------------------------------1-----1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 114 STR:RPRED 25.3 SQ:SECSTR ##############################################################################################################################################################################################################################################################################EEETTTTEEEEEETTEEEEEEEcccccTTc###ccccEEEEccccEEEEEc#ccccccc######cccEEEEEEEccccccEEEEcTTcTTHHHHHcccccEEEcHHHHHHHHHHccTTcEEEE######################################################## DISOP:02AL 1-2, 29-41, 427-450| PSIPRED cccEEEEHHHHHHHHHHHEEEEEEEccccccccccccccccccEEEEEEccccccccccccEEEEEcccEEEEEEEEEccccccccccccccccccccccccccccccccEEEEEEcccccEEEcccccccccEEEEEEEEEcccccEEEEccEEcccccccccccEEcccccccccEEEEEEEEEEEEccccccHHHccEEEEEEcccccEEEEEEEcccEEEEEEccccccccEEEEEEEcccccccccEEEcccccEEEEEccEEEEEEEccccEEEEEEccEEEEEEEEEEccccccccccccEEEEEEEccccEEEccccccccccccccccccccEEEEEEcccEEEEEEccccccccccccccEEEccHHHHHHHHHHcccccEEEEEccccccccccccccccccHHHHccccccccccccccccccccccccccccccccc //