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Thermobifida fusca YX (tfus0)
Gene : AAZ55252.1
DDBJ      :             similar to Molecular chaperone (small heat shock protein)
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  263/915 : Eukaryota  37/199 : Viruses  0/175   --->[See Alignment]
b.15.1
:260 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   160->247 2byuA PDBj 2e-07 36.8 %
:RPS:PDB   156->249 2byuA PDBj 2e-19 31.9 %
:RPS:SCOP  121->258 1gmeA  b.15.1.1 * 2e-25 28.3 %
:HMM:SCOP  115->257 1gmeA_ b.15.1.1 * 4.3e-32 35.0 %
:RPS:PFM   160->257 PF00011 * HSP20 1e-16 43.9 %
:HMM:PFM   161->257 PF00011 * HSP20 7.9e-25 35.1 97/102  
:BLT:SWISS 116->257 SP21_STIAU 1e-16 34.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55252.1 GT:GENE AAZ55252.1 GT:PRODUCT similar to Molecular chaperone (small heat shock protein) GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1416342..1417124) GB:FROM 1416342 GB:TO 1417124 GB:DIRECTION - GB:PRODUCT similar to Molecular chaperone (small heat shock protein) GB:PROTEIN_ID AAZ55252.1 GB:DB_XREF GI:71915350 InterPro:IPR002068 LENGTH 260 SQ:AASEQ MARVRGPFVLVDGRGPAVVLRMHLHGQGRGRLRGARRVGGVLSTSRLQLGLVGRPAPPPPVTRNTLNKVEFMGLKFGDDHRRKAARPPHLNPPPPGGHQRVRGGTDMALPVVRSSQPTTGWDPFRELNELHTQLHRWMDSVLERTSGLTADPLSWSPLADLSETEDAYLVEVEVPGVSREDISIDLSGTELVITGERKEREREGWFRHRTRSVGRFHYAVTLPRDIDPDGVDATLSQGVLTVRIPKSKALKPRRIAITER GT:EXON 1|1-260:0| BL:SWS:NREP 1 BL:SWS:REP 116->257|SP21_STIAU|1e-16|34.3|134/188| SEG 20->42|lrmhlhgqgrgrlrgarrvggvl| SEG 87->98|pphlnppppggh| BL:PDB:NREP 1 BL:PDB:REP 160->247|2byuA|2e-07|36.8|87/101| RP:PDB:NREP 1 RP:PDB:REP 156->249|2byuA|2e-19|31.9|94/101| RP:PFM:NREP 1 RP:PFM:REP 160->257|PF00011|1e-16|43.9|98/101|HSP20| HM:PFM:NREP 1 HM:PFM:REP 161->257|PF00011|7.9e-25|35.1|97/102|HSP20| RP:SCP:NREP 1 RP:SCP:REP 121->258|1gmeA|2e-25|28.3|138/150|b.15.1.1| HM:SCP:REP 115->257|1gmeA_|4.3e-32|35.0|143/0|b.15.1.1|1/1|HSP20-like chaperones| OP:NHOMO 557 OP:NHOMOORG 308 OP:PATTERN ----------------------------1-------------------11222--1---------1-- --1-1----------11---------------1111-13-32222----11-1---1----11----2--2-----------2-111----11----------1----31----------------1-1-1---1-1112211113432422111---------11-224-------------2113321--1---------1--------11-----111-----------------------------------------------------------------------------------------------------------2221221-1-----------1--1---2----2---1-11-----1222--3-------4--331-1--1----------3-1521416112------1131-1-1-------1-1-----111111111---------------------------1-------1-1--5------311211323334421333322113131---31-21----3-11-2-121--1--------1121--35221346122112-515436233122222261---1---------------1111-22--1-21--1--1-----------1----1----2112-------------------------------------------1------------------------------------------------11111111223-22--------------------------11---------3-1-1----11111-111------------------------1111--3---------------1---------------------------1-11------12- ----11--------3-----11-2121----------211111----------------------2--------------------27-632-446-----2-----141-----------------------------------------------------------------21------114381--2------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 131 STR:RPRED 50.4 SQ:SECSTR ########################################################################################################################ccTTcGG#########GccHHGGGTTcccccHHEEcccEEEEEcccEEEEEEEcTTccGGGEEEEEETTEEEEEEccccccTTccccccccccccEEEEEEccccccGGGcEEEEETTEEEEEEEccccccccccccccc DISOP:02AL 1-4, 68-106, 143-152, 202-203, 248-260| PSIPRED cccccccEEEEEccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHccccccccccccHHcccccccccccccccHHHHcccccccccccccccEEcccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEcccEEEEEEEEccccccEEEEEEEccEEEEEEEcccccccccEEEEEEEEEEEEEEEEccccccccEEEEEEEccEEEEEEEcccccccEEEEEEEc //