[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ55256.1
DDBJ      :             actinorhodin polyketide beta-ketoacyl synthase alpha subunit / 3-oxoacyl-ACP synthase I
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  860/915 : Eukaryota  184/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:420 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->416 1tqyA PDBj e-134 61.8 %
:RPS:PDB   3->412 2bz4D PDBj 1e-76 26.3 %
:RPS:SCOP  3->244 1dd8A1  c.95.1.1 * 1e-59 25.2 %
:RPS:SCOP  219->412 1tqyB2  c.95.1.1 * 2e-58 32.3 %
:HMM:SCOP  2->255 1e5mA1 c.95.1.1 * 1.4e-64 37.2 %
:HMM:SCOP  217->421 1tqyA2 c.95.1.1 * 1.5e-66 44.9 %
:RPS:PFM   4->244 PF00109 * ketoacyl-synt 3e-18 32.4 %
:RPS:PFM   279->371 PF02801 * Ketoacyl-synt_C 7e-15 43.0 %
:HMM:PFM   3->250 PF00109 * ketoacyl-synt 8.6e-61 34.8 233/253  
:HMM:PFM   258->372 PF02801 * Ketoacyl-synt_C 9.8e-42 40.9 115/119  
:BLT:SWISS 3->412 KAS1_STRGA e-146 63.7 %
:PROS 158->174|PS00606|B_KETOACYL_SYNTHASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55256.1 GT:GENE AAZ55256.1 GT:PRODUCT actinorhodin polyketide beta-ketoacyl synthase alpha subunit / 3-oxoacyl-ACP synthase I GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1421208..1422470 GB:FROM 1421208 GB:TO 1422470 GB:DIRECTION + GB:PRODUCT actinorhodin polyketide beta-ketoacyl synthase alpha subunit / 3-oxoacyl-ACP synthase I GB:PROTEIN_ID AAZ55256.1 GB:DB_XREF GI:71915354 InterPro:IPR000794 LENGTH 420 SQ:AASEQ MTRRVVITGIGVIAPGGIGTQAFWNLLTEGRTATRPISLFDASVFRSRIAAEVDFHPEEHGLTAQQARTMDRAAQFAVVATREAMADSGLTIDRPDRVGVVVGSAVGASTSLENQYRLSSDDGQLDPVRYDPAVTDLYRHFVPSSFATDVAWEVGAEGPATVVSTGCTSGLDSVGYAADLVREGIVDAVVVGSTDAPLTPITSACFDAIKATSPRNDTPATASRPFDRTRNGFVLGEGCAMFVIEEREHARARGARIYGELAGYATRSNAYHMTGLRADGHEMAEAIRVALHEARVNPDDIDYINAHGSGTKQNDRHETAAFKKALGSHAYRTPVSSIKSMIGHSLGAIGSIEIAACLLAMRDNIVPPTANLTEPDPECDLDYVPITAREHRVDTVLTVGSGFGGFQSAMVLTTADRRLP GT:EXON 1|1-420:0| BL:SWS:NREP 1 BL:SWS:REP 3->412|KAS1_STRGA|e-146|63.7|410/426| PROS 158->174|PS00606|B_KETOACYL_SYNTHASE|PDOC00529| SEG 98->109|vgvvvgsavgas| SEG 245->256|eereharargar| BL:PDB:NREP 1 BL:PDB:REP 3->416|1tqyA|e-134|61.8|414/421| RP:PDB:NREP 1 RP:PDB:REP 3->412|2bz4D|1e-76|26.3|396/402| RP:PFM:NREP 2 RP:PFM:REP 4->244|PF00109|3e-18|32.4|225/245|ketoacyl-synt| RP:PFM:REP 279->371|PF02801|7e-15|43.0|93/118|Ketoacyl-synt_C| HM:PFM:NREP 2 HM:PFM:REP 3->250|PF00109|8.6e-61|34.8|233/253|ketoacyl-synt| HM:PFM:REP 258->372|PF02801|9.8e-42|40.9|115/119|Ketoacyl-synt_C| RP:SCP:NREP 2 RP:SCP:REP 3->244|1dd8A1|1e-59|25.2|238/253|c.95.1.1| RP:SCP:REP 219->412|1tqyB2|2e-58|32.3|189/194|c.95.1.1| HM:SCP:REP 2->255|1e5mA1|1.4e-64|37.2|247/250|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 217->421|1tqyA2|1.5e-66|44.9|205/205|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 3890 OP:NHOMOORG 1044 OP:PATTERN -------------------------------------------------------------------- 2371K2222221-1BCCII-ICCCP8IHIIHCEBAB63462MEL1111121123211411GH21R5RWHT3--------1112111111114111111-257553J66241111111111111111111211111122255111H346456691111222211322DCBU51111111111111111111121K1111111121111111211471121114111111111A3111111111111111111112-111111-1-11111111111111122211111241111111111111111111111111111111111111431111111111K1551111112--1211211311111111111111317222233333754333344633333333333333-4464654447425557446555554853253433333441111111113322213111111111111111111111111111111211112221453342FE87973345DDDD2G564222312568123324336732331223411122221223225143251243142221343522A463313XJ331321111111111111111111111334432274324456666465666666556551-22221111111B293243255A288322-522222323353522222433483A8422222222222222225223222221746566545565112435333766742A5511113111111133111441132214A44358D66352622879411111111234471222224644443333333322222212--1111--------1-1-------------------------11111111111A2 1152af3-311-1125BB7PGHIMZPQ222433JJ86AAA57A222FDBHE9C586LKA878111111-111111111-111111111-123B112------3111-142M24243-2121122412213A2-1211111222411111-31142422122227814447A54872334q433388459F473351223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 417 STR:RPRED 99.3 SQ:SECSTR ccccEEEEEEEEEcTTcccHHHHHHHHHHTccccEEcHHHHHTTccccEEcccccccTTcTccHHHHTTccHHHHHHHHHHHHHHHHHTccHHHHTTcTTEEEEEEcccccHHHHHHHHHHHHHTcTTTHHHHcTTcHHHHcTTHHHHHHHTTTTccccEEccccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEcccHHHHHHHHHHHTcccccTTcGGGcccTTcTTccccccccEEEEEEEEEHHHHHHTTccccEEEEEEEEEEcccccccccTTcHHHHHHHHHHHTTcTcccccccEEEccccccHHHHHHHHHHHHHHHTTcGGccEEEcTHHHHcccGGGHHHHHHHHHHHHHHHTEEccccccccccGGGTTcEEccccEEccccEEEEEEEETTTEEEEEEEEcccc### DISOP:02AL 276-280, 417-420| PSIPRED ccccEEEEEEEEEccccccHHHHHHHHHcccccccccccccccccccccccccccccHHccccHHHHHHccHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHccccccccccccccccccccccccEEEEccEEEEEEEcHHHHHHcccEEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccHHHccEEEEccccccccHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEccccccEEEEEEEcccccccc //