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Thermobifida fusca YX (tfus0)
Gene : AAZ55315.1
DDBJ      :             transcriptional regulator, GntR family
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  319/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.5a.78.1
:244 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->221 2di3B PDBj 1e-10 29.5 %
:RPS:PDB   9->230 1e2xA PDBj 5e-22 15.0 %
:RPS:SCOP  9->67 1e2xA1  a.4.5.6 * 4e-08 30.5 %
:RPS:SCOP  99->223 1e2xA2  a.78.1.1 * 1e-17 14.9 %
:HMM:SCOP  2->121 1v4rA1 a.4.5.6 * 2.4e-12 33.3 %
:RPS:PFM   31->67 PF00392 * GntR 1e-04 51.4 %
:RPS:PFM   104->223 PF07729 * FCD 3e-06 35.0 %
:HMM:PFM   102->222 PF07729 * FCD 1.3e-27 30.6 121/125  
:HMM:PFM   15->71 PF00392 * GntR 3.3e-13 42.1 57/64  
:BLT:SWISS 12->237 YCBG_BACSU 9e-17 30.0 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55315.1 GT:GENE AAZ55315.1 GT:PRODUCT transcriptional regulator, GntR family GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1483073..1483807 GB:FROM 1483073 GB:TO 1483807 GB:DIRECTION + GB:PRODUCT transcriptional regulator, GntR family GB:PROTEIN_ID AAZ55315.1 GB:DB_XREF GI:71915413 InterPro:IPR000524 LENGTH 244 SQ:AASEQ MAHPPLRPQKTAMLVAQQIVADIHRRGNRVGDRLPPERVMLDEYSVGRGTLRESLRFLELQGVISLRPGPGGGPIVQQPDASSLTTTLTLLMQFEKAPFRTITEARTALEPMMARLASERMSDEKLKELKESVDMMRDNLEDQEVFLEQNRRFHDLIAHGSGNVMFGYLVDSLLGILDGSAIGIDYPQFRRAAVHKAHLNIYEAIASRDPEASAEAMAQHIHEYVRYAEKKFPEVLDAPIVWSS GT:EXON 1|1-244:0| BL:SWS:NREP 1 BL:SWS:REP 12->237|YCBG_BACSU|9e-17|30.0|210/233| COIL:NAA 27 COIL:NSEG 1 COIL:REGION 124->150| SEG 68->74|pgpgggp| SEG 84->91|ltttltll| BL:PDB:NREP 1 BL:PDB:REP 29->221|2di3B|1e-10|29.5|190/230| RP:PDB:NREP 1 RP:PDB:REP 9->230|1e2xA|5e-22|15.0|220/222| RP:PFM:NREP 2 RP:PFM:REP 31->67|PF00392|1e-04|51.4|37/64|GntR| RP:PFM:REP 104->223|PF07729|3e-06|35.0|120/125|FCD| HM:PFM:NREP 2 HM:PFM:REP 102->222|PF07729|1.3e-27|30.6|121/125|FCD| HM:PFM:REP 15->71|PF00392|3.3e-13|42.1|57/64|GntR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| RP:SCP:NREP 2 RP:SCP:REP 9->67|1e2xA1|4e-08|30.5|59/73|a.4.5.6| RP:SCP:REP 99->223|1e2xA2|1e-17|14.9|121/149|a.78.1.1| HM:SCP:REP 2->121|1v4rA1|2.4e-12|33.3|90/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 575 OP:NHOMOORG 322 OP:PATTERN ------1-------------------------------------------------------1----- 1------1-------21----1--25-----11-1--266-636--------633-------4--11-112-----------3--------------------1-11------------------------------11--------------------------------------------1--------1------11-1-1-1214-1111--111--2--1-----121--------------1------------------------------111-111---------1-----------------------1111-3-142222222121--33-11121------1-66-11---12----------122------1-2----------11111111113---2-----131-533154444465-2211-211-12112-------------1--------------------------------1-11-1111-1-12312----1132------3162224--222-1312224-51---------1111111--------1--111--2--1-1-1--2211-------1------------------------------122----11121112-2122211-211-------------24211411111111111-111111111111111111122232111313232333332322321111111--233333333333----------------12-----1----1-11-------------1111211412222-432-------------------1--11------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 234 STR:RPRED 95.9 SQ:SECSTR HccccccGccHHHHHHHHHHHHHHTTcccTTcccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEETTTTEEEEEccHHHHccGGGHHHHHHHcTTTHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHGGGTccccHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHTcGGGHHHHHHHHHHHHHHHHHHHHHH########## DISOP:02AL 1-13| PSIPRED ccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHHHHHHHHHcccEEEEEcccEEEEEccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //