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Thermobifida fusca YX (tfus0)
Gene : AAZ55342.1
DDBJ      :             similar to ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:417 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   197->338 2g29A PDBj 8e-05 24.2 %
:RPS:PDB   107->409 1bkaA PDBj 7e-19 10.0 %
:RPS:SCOP  131->353 1us4A  c.94.1.1 * 9e-13 19.2 %
:HMM:SCOP  104->351 1us5A_ c.94.1.1 * 1.7e-28 28.1 %
:RPS:PFM   132->345 PF09084 * NMT1 7e-07 31.4 %
:HMM:PFM   133->346 PF09084 * NMT1 1.5e-16 25.6 199/216  
:BLT:SWISS 217->409 YTLA_BACSU 1e-05 21.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55342.1 GT:GENE AAZ55342.1 GT:PRODUCT similar to ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1514304..1515557 GB:FROM 1514304 GB:TO 1515557 GB:DIRECTION + GB:PRODUCT similar to ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components GB:PROTEIN_ID AAZ55342.1 GB:DB_XREF GI:71915440 LENGTH 417 SQ:AASEQ MCGRPTKIPSLDIGYNYLNHDLVPVWRISLTDGSVRKGVPYPREPVLPAPHRQDRIPQLVRTAIMGSARRSGAFRALALAAALTFTLSACGPSESDGPAQNEDGLTTVRVGLAEPTFNTALINLVIDEDIDANHGLDMQPTRSGAGSTNQIAALRAGEYDFAGVGTATAADAVAEGAGLVIVAGTGGLINNIVLNADVAKGLDVAPDDPVEERIKALRGLTIATSPPGSSSNLTLRHLVQQHGLDPDKDLNIVPVTDTSSIVAGIRQGKFDGSFFGVGVADANIADGSGTLWISLPRGDIEEFNELIGVCIVSTREFVDNNPEIVEAFHAALAEAQEFVASDPEAAGKALHENSFANLDADVFATAWEQAQTGYPEGVLFTRENWETYLELFGDASDKDLESIVYEDFVAEPARGES GT:EXON 1|1-417:0| BL:SWS:NREP 1 BL:SWS:REP 217->409|YTLA_BACSU|1e-05|21.8|188/334| SEG 66->89|gsarrsgafralalaaaltftlsa| SEG 162->178|agvgtataadavaegag| BL:PDB:NREP 1 BL:PDB:REP 197->338|2g29A|8e-05|24.2|132/385| RP:PDB:NREP 1 RP:PDB:REP 107->409|1bkaA|7e-19|10.0|281/688| RP:PFM:NREP 1 RP:PFM:REP 132->345|PF09084|7e-07|31.4|185/200|NMT1| HM:PFM:NREP 1 HM:PFM:REP 133->346|PF09084|1.5e-16|25.6|199/216|NMT1| RP:SCP:NREP 1 RP:SCP:REP 131->353|1us4A|9e-13|19.2|219/298|c.94.1.1| HM:SCP:REP 104->351|1us5A_|1.7e-28|28.1|231/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 8 OP:NHOMOORG 6 OP:PATTERN -------------------------------------------------------------------- -------------------------------------2-----1----------1---------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 309 STR:RPRED 74.1 SQ:SECSTR #########################################################################################################ccEEEEccccEccHHHHHHHHHHHHHHTTcccEEEEEcccHHHHHHHHHHTTccccEEEcHHHHHHHHcTTTccEEEEEEEEEccccEEcEEEEEHEEEEEEccccccTTTTTcccEEccTTcTTTTHHHHHHcHHHHccccTTcccHHHHHHHHcccEEcTTccTTTcHHHHTTccccGGGTTcccTTcTTcHHccccHHHHHHHHHHHHHHTTccccEEEEccHHHHHcccHHHHTTEEEEcTTccEEcccEEEEccEEEEccccccHHHcccHHHHHHHHHHHHcTTccTTccTTcccTTcHHHHT### DISOP:02AL 1-6, 97-101, 416-417| PSIPRED cccccccccccccccHHHcccccEEEEEEEcccccccccccccccccccccHHHccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEcccHHHHHHHHHHHHccHHHcccEEEEEEccccHHHHHHHHHcccEEEEEEcHHHHHHHHHccccEEEEEEcccccEEEEEEccccccEEEEccccccccHHHHcccEEEEccccccHHHHHHHHHHHHcccHHHcEEEEEcccHHHHHHHHHcccEEEEEEEccHHHHHHHHccccEEEEEEcccHHHcccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccHHHHccHHHHHHHHcccc //