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Thermobifida fusca YX (tfus0)
Gene : AAZ55413.1
DDBJ      :             putative integral membrane transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  259/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:404 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   199->320 3b8eA PDBj 2e-04 11.6 %
:HMM:SCOP  1->392 1pw4A_ f.38.1.1 * 8.3e-46 25.5 %
:HMM:PFM   21->352 PF07690 * MFS_1 4.4e-22 23.8 328/353  
:BLT:SWISS 3->393 YYCB_BACSU 1e-33 29.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55413.1 GT:GENE AAZ55413.1 GT:PRODUCT putative integral membrane transporter GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1593041..1594255 GB:FROM 1593041 GB:TO 1594255 GB:DIRECTION + GB:PRODUCT putative integral membrane transporter GB:PROTEIN_ID AAZ55413.1 GB:DB_XREF GI:71915511 InterPro:IPR007114 LENGTH 404 SQ:AASEQ MAPHPTPTRRARWHLAAGIVLAALNLRTAITSIGPLLTEITTDLHLTPVTTGLLTTLPVLCFAGFGALTPALQRRWGDHHVLLAALAALTLGLASRALVTDPWLFLALSTLALAGGAVGNVLLPTLVKQHFPHRVGLLTAAYTTAMALGTTLAAAATVPLATAFHGNWRPALASYALLGLVATIPWALALRNEPRRHPGDQPISIRTVLTTALGWQSTLFFATQSAIAYIMFGWFAHFLRDHGMPAPHAGLVLSYLTALAIPTSLAVPAVVARMRNPVLLIALFVTCYLVGFAGLLTAPVTGAWLWATLIGIGMSSFPLALTFFGLRARSPHGTAALSAATQGVGYLLAGTGPFLFGLLRDLSGDWRLSIGLLVALTFAHGGCGILLSRPRHIEDAVVPSPVAP GT:EXON 1|1-404:0| BL:SWS:NREP 1 BL:SWS:REP 3->393|YYCB_BACSU|1e-33|29.8|386/402| TM:NTM 11 TM:REGION 15->37| TM:REGION 49->71| TM:REGION 78->100| TM:REGION 108->130| TM:REGION 141->163| TM:REGION 170->191| TM:REGION 210->232| TM:REGION 248->270| TM:REGION 276->298| TM:REGION 304->325| TM:REGION 335->357| SEG 46->60|ltpvttgllttlpvl| SEG 82->98|llaalaaltlglasral| SEG 104->119|lflalstlalaggavg| SEG 137->163|lltaayttamalgttlaaaatvplata| RP:PDB:NREP 1 RP:PDB:REP 199->320|3b8eA|2e-04|11.6|121/998| HM:PFM:NREP 1 HM:PFM:REP 21->352|PF07690|4.4e-22|23.8|328/353|MFS_1| HM:SCP:REP 1->392|1pw4A_|8.3e-46|25.5|388/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 311 OP:NHOMOORG 259 OP:PATTERN -------------------------------------------------------------------- ----11-22221-11------1--11-----1111111111---112--111221111--111-2121211----------------------------------------------------------------------------------------------------------------1-1-------1-------------1-2-1121--1-1112--111111111--------------1---2--1-11-1-----1111--111-----------1--1111111-111-------------1-1---111----11---1111-1---------------------------------------1----------------------111-111111----------------111-111-------------------------1------1----------------------------------------1----11--------------11-------111---------1--1--1-11---------1-1------1--------------------------------11-1-1-1--------------11-----1111-1111-111--1--1-111---1---------11--11-2221211122-222221122221222122123211--11111111111-11111111111-1------------------------------21---------------11-11--111--22222312-121311221-----------------------1111111111--------------------------------------------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 121 STR:RPRED 30.0 SQ:SECSTR ######################################################################################################################################################################################################HHHHccccccccccccccccccccccccccTHHHHTTTTTcccccHHHHHHHHHHHHHHHHHHccccccccTTcccccHHHHHHHHHHHHHHHHcTTGccccTTTT#TTTTHHHHHHHHHHH#################################################################################### DISOP:02AL 1-8, 191-207, 402-404| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccc //