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Thermobifida fusca YX (tfus0)
Gene : AAZ55417.1
DDBJ      :             putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  515/915 : Eukaryota  166/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:409 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->401 1t9gC PDBj 3e-56 35.5 %
:RPS:PDB   12->403 3d9fC PDBj 3e-80 22.9 %
:RPS:SCOP  4->238 1siqA2  e.6.1.1 * 1e-44 28.9 %
:RPS:SCOP  259->407 1siqA1  a.29.3.1 * 8e-38 28.4 %
:HMM:SCOP  7->240 1jqiA2 e.6.1.1 * 1.1e-56 39.3 %
:HMM:SCOP  255->407 1r2jA1 a.29.3.1 * 1.2e-48 48.4 %
:RPS:PFM   20->61 PF02771 * Acyl-CoA_dh_N 3e-04 42.9 %
:RPS:PFM   131->184 PF02770 * Acyl-CoA_dh_M 2e-07 48.1 %
:RPS:PFM   258->403 PF00441 * Acyl-CoA_dh_1 5e-31 47.6 %
:HMM:PFM   259->403 PF00441 * Acyl-CoA_dh_1 1.1e-52 47.9 144/150  
:HMM:PFM   131->183 PF02770 * Acyl-CoA_dh_M 1.4e-24 51.0 51/52  
:HMM:PFM   15->120 PF02771 * Acyl-CoA_dh_N 1.1e-15 35.6 104/113  
:BLT:SWISS 5->401 ACADM_DROME 2e-61 39.2 %
:PROS 133->145|PS00072|ACYL_COA_DH_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55417.1 GT:GENE AAZ55417.1 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1598753..1599982 GB:FROM 1598753 GB:TO 1599982 GB:DIRECTION + GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID AAZ55417.1 GB:DB_XREF GI:71915515 InterPro:IPR006089 LENGTH 409 SQ:AASEQ MTDETPASFSLELSEDLIHIRDWVHEFARDVMRPAAAEWDEREETPWPILQEAAKIGLYSLDFFANQMFDPSGIAIPVVYEELYWGDPGIALALTGTTLAAVAVSANGTQEQILEWTPQMFGTPDDIKLGAFCVSEPDAGSDVGAIRTRAVYDEAKDEWVLNGTKTWITNGGIADVHVVVASVDPELGTRGQASFVIPPGTKGLSQGQKFSKHGIRASHTAEVILDDVRIPGRCLLGGKEKLDQRLARAREGRRSKGQAAMKTFEASRPAVGAMAVGCARAAYEYARDYVRQREQFGRPIGDNQAVAFTLADMATRIDAARLLVWRASWMARYGKEFANAEGSMSKLYASETATWVTQNAIRLLGGNGYTRDYPVERWHRDATIFTIFEGASEIQRLIIGRAITGLPLR GT:EXON 1|1-409:0| BL:SWS:NREP 1 BL:SWS:REP 5->401|ACADM_DROME|2e-61|39.2|372/419| PROS 133->145|PS00072|ACYL_COA_DH_1|PDOC00070| SEG 91->106|alaltgttlaavavsa| BL:PDB:NREP 1 BL:PDB:REP 9->401|1t9gC|3e-56|35.5|369/388| RP:PDB:NREP 1 RP:PDB:REP 12->403|3d9fC|3e-80|22.9|376/430| RP:PFM:NREP 3 RP:PFM:REP 20->61|PF02771|3e-04|42.9|42/113|Acyl-CoA_dh_N| RP:PFM:REP 131->184|PF02770|2e-07|48.1|52/53|Acyl-CoA_dh_M| RP:PFM:REP 258->403|PF00441|5e-31|47.6|145/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 259->403|PF00441|1.1e-52|47.9|144/150|Acyl-CoA_dh_1| HM:PFM:REP 131->183|PF02770|1.4e-24|51.0|51/52|Acyl-CoA_dh_M| HM:PFM:REP 15->120|PF02771|1.1e-15|35.6|104/113|Acyl-CoA_dh_N| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 4->238|1siqA2|1e-44|28.9|228/236|e.6.1.1| RP:SCP:REP 259->407|1siqA1|8e-38|28.4|148/154|a.29.3.1| HM:SCP:REP 7->240|1jqiA2|1.1e-56|39.3|229/231|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 255->407|1r2jA1|1.2e-48|48.4|153/153|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 5710 OP:NHOMOORG 711 OP:PATTERN 44----6644544546-243422DA6661-7A-----------------------------5761--- 4556W3-5111846RjWII-IY44XZIIIIIJeanaTd**4Y9U2133-11-667668--DBS1EFQHHJD--------383B-----11111122---41445464535--------------------------66588---B3-1--------------------12-------------67778--1E735555545555555553455545557CA9A11------53-22121211222222111-1--1------------------------------------------------------------------111315444444444423222221-6-3-5-13-A91597-17---11-3-61-FEEJ-----3-QFK433KCLIF88787885755-34844D2979K-4552534556568D7J889B6665D9F111111119----894-----------------------------1FELD17PFAJCDFGMC7699999LBEDDD8DNAUQgbX24DEA97AA9HBEGIU-16----34----------B653bEJ-----------765-B-5--7777BB66------------1--------------32-59-549514222343822226364254---1---------2-411--2223233222-2222222212222222221-------13231333342314223-1121111------1-----1----3111115555-F911---------------EEECEAC4566-IGJK7FACEA79AC426-------------2-----24-225555555555-------2BBA9BB----------1-------------------------1--11-1------ ----569-731-999CA989888978A9A676776778886888A997678ACE596766664--1-----------------------6A6A7866555988ABB-B44HEUABEE87888D9JC6I8S*E-EBQ6786C78FA4A978B74EACBAL9EI5FCD877BCEHDF2233Z21243655C83344E8987 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 407 STR:RPRED 99.5 SQ:SECSTR cccTTTTcccccccHHHHHHHHHHHHHHHHTGGGHHHHHTHHHHTTHHHHHHHHHTTTTGGGccGGGTccccHHHHHHHHHHHHTTccTTHHHHHHHHHHHHHHHHcccHHHHHHHcHHHHccccccccEEEEcccTTccTTTcccccEEEEETTcTEEEEEEEEEccTTTTTccEEEEEEEEcccTTcGGEEEEEEcHHHHHTccGGGEEccccTTccccEEEEEEEEEEGGGccccTTHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTccccTTTHHHHHHHHHHHTT## DISOP:02AL 409-410| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHccccccEEEEEEcccccccccHHHEEEEEEEEccccEEEEEEEEEEEcccccccEEEEEEEEccccccccEEEEEEEcccccEEEEccccccccccccEEEEEEccEEccHHHHccccccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccc //