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Thermobifida fusca YX (tfus0)
Gene : AAZ55511.1
DDBJ      :             similar to TRAP-type C4-dicarboxylate transport system periplasmic component
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:431 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   75->347 2zzxD PDBj 2e-06 25.6 %
:RPS:PDB   64->383 3b50A PDBj 2e-09 17.1 %
:RPS:PFM   72->297 PF03480 * SBP_bac_7 1e-10 24.8 %
:HMM:PFM   73->360 PF03480 * SBP_bac_7 5.4e-26 19.6 275/286  
:BLT:SWISS 65->250 Y4MM_RHISN 8e-05 27.1 %
:BLT:SWISS 298->412 YR474_MIMIV 7e-04 22.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55511.1 GT:GENE AAZ55511.1 GT:PRODUCT similar to TRAP-type C4-dicarboxylate transport system periplasmic component GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1705357..1706652 GB:FROM 1705357 GB:TO 1706652 GB:DIRECTION + GB:PRODUCT similar to TRAP-type C4-dicarboxylate transport system periplasmic component GB:PROTEIN_ID AAZ55511.1 GB:DB_XREF GI:71915609 LENGTH 431 SQ:AASEQ MVTRRGNKGAATAASCLALGVVGALTLTACADTATSAGGGSGQGVEYGASKEEYQAAFADLDTITLTTQSPAPKGSVTGANVEAYFEALTEWSGGKLQFDIAYANAIVDPAEADDALIDGRLDIAQVLPIYEPAEYPANAALIEASFLSDHSVVVGALQSNAWPLEVAFNTPEVMQEYEDKGIKLLLPSYNSGSNALFCSKERRSLKDLKGMQAAAGGQAQTKEIEALGGSAASVAYPELYESLQRGVVDCSVSSLTVGVLGGFIEAAPHVVVDPEAGFALAPGAMAISQATWDSLPLVAQQLMWDRLDVFLSSNISDKIWPNIVEASKQVADAGGSIEVFEEDARKALNDVNAELLEELSTTPAIEDGDAFVARIKDASAKWSTIVEDELGYTNETDYNGFAEWYTEDAVDLDPYVAKVFEEILLEHRPS GT:EXON 1|1-431:0| BL:SWS:NREP 2 BL:SWS:REP 65->250|Y4MM_RHISN|8e-05|27.1|177/541| BL:SWS:REP 298->412|YR474_MIMIV|7e-04|22.7|110/413| SEG 24->50|altltacadtatsagggsgqgveygas| SEG 211->221|gmqaaaggqaq| BL:PDB:NREP 1 BL:PDB:REP 75->347|2zzxD|2e-06|25.6|250/329| RP:PDB:NREP 1 RP:PDB:REP 64->383|3b50A|2e-09|17.1|304/310| RP:PFM:NREP 1 RP:PFM:REP 72->297|PF03480|1e-10|24.8|214/284|SBP_bac_7| HM:PFM:NREP 1 HM:PFM:REP 73->360|PF03480|5.4e-26|19.6|275/286|SBP_bac_7| GO:PFM:NREP 2 GO:PFM GO:0006810|"GO:transport"|PF03480|IPR018389| GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF03480|IPR018389| OP:NHOMO 11 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- -------1--------------------------------------------------------------2--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-111-1--1-------------------------------------------------------2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 327 STR:RPRED 75.9 SQ:SECSTR ##############################################################cEEEEEEccccTTcHHHHHHHHHHHHHHHHTTTcEEEEEEcTTTTccHHHHHHHHHHTcccEEEEcGGGGGGTcGGGGGGGcTTTcccHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHcEEEEEEEEEEEEEEEEccccccGGGGTTcEEEEcccHHHHHHHHTTcEEEEccGGGHHHHHHTTcccEEEEEHHHHHHTTGGGcccEEEcccccEEcEEEEEEEEEHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcEEccccHHHHHHTHHHHHHHHHHHHcEEEcHHHHHHHHHHHTcccccHHHHHH########################################## DISOP:02AL 1-7, 429-431| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHccEEEEEEEEccccccHHHHHHHHHHccEEEEEccHHHHccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccEEEEEEEccccEEEEEccccccHHHHcccEEEEccHHHHHHHHHHcccEEEccHHHHHHHHHccEEEEEEccHHHHHHccHHHHcccEEEcccccccccccEEEEEHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHccc //