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Thermobifida fusca YX (tfus0)
Gene : AAZ55528.1
DDBJ      :             putative ferrichrome transport system permease protein
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  332/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:343 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   268->330 2nq2B PDBj 6e-06 33.9 %
:RPS:SCOP  52->338 1l7vA  f.22.1.1 * 5e-24 22.1 %
:HMM:SCOP  9->338 1l7vA_ f.22.1.1 * 5.2e-67 43.0 %
:RPS:PFM   92->338 PF01032 * FecCD 7e-20 28.3 %
:HMM:PFM   31->337 PF01032 * FecCD 1.5e-84 43.6 307/311  
:BLT:SWISS 158->340 YFMD_BACSU 2e-18 33.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55528.1 GT:GENE AAZ55528.1 GT:PRODUCT putative ferrichrome transport system permease protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1724518..1725549 GB:FROM 1724518 GB:TO 1725549 GB:DIRECTION + GB:PRODUCT putative ferrichrome transport system permease protein GB:PROTEIN_ID AAZ55528.1 GB:DB_XREF GI:71915626 LENGTH 343 SQ:AASEQ MAKAIVTTPPAPLQASPARTTLLLGGTLLALAAAVLLSLTVGSKPTTVAQVWAAVTGTADPYTTTVVASRYPRTILGILAGAALAAAGLLLQGITRNPLADPGLLGVNAGAMAAVVTAIALLGPTSTTATVWWALPGALLAGLVAYLLGGRESTGSTVRLVLAGAVISAVLTAYVQAVALSMPHVFDNYRYWVVGSLAGRGFDVIASVLPFLTAGALLALLLSSSLNTLALGEETATALGANPFLIRSGGLAAATLLAAGATAATGPIAFVGLAVPHVVRALIGGDFRTCMPLALLAGPTLLLLADVVGRFLLRPAELMVGVVTAFVGAPFLFHAVRRMRGPS GT:EXON 1|1-343:0| BL:SWS:NREP 1 BL:SWS:REP 158->340|YFMD_BACSU|2e-18|33.5|182/333| TM:NTM 10 TM:REGION 21->43| TM:REGION 73->95| TM:REGION 101->123| TM:REGION 131->152| TM:REGION 160->182| TM:REGION 203->225| TM:REGION 239->261| TM:REGION 264->286| TM:REGION 289->311| TM:REGION 315->336| SEG 20->43|ttlllggtllalaaavllsltvgs| SEG 75->91|ilgilagaalaaaglll| SEG 103->122|gllgvnagamaavvtaiall| SEG 134->150|alpgallaglvayllgg| SEG 212->232|ltagallalllssslntlalg| SEG 249->266|gglaaatllaagataatg| SEG 293->305|lallagptlllla| BL:PDB:NREP 1 BL:PDB:REP 268->330|2nq2B|6e-06|33.9|62/300| RP:PFM:NREP 1 RP:PFM:REP 92->338|PF01032|7e-20|28.3|247/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 31->337|PF01032|1.5e-84|43.6|307/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 52->338|1l7vA|5e-24|22.1|285/324|f.22.1.1| HM:SCP:REP 9->338|1l7vA_|5.2e-67|43.0|321/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 770 OP:NHOMOORG 354 OP:PATTERN -----------------------1-111----1--11-11111--4132132------111------- ----14225564311----------1----------2922-2111111121-311--2--23-342224B3---------2-1------------------------11----------------1-1-11--1---221111-5-3-1222-----------31--12----------------1-----1337787867628788874666558882534232-----1B8-22221222222222211121----------11----1---------------1--11111111111-------------1---------12514666547616------52314---2---222---1111----1-3--1-----1--------------2------------2-----------1--331------21--1--1-311111-----------------------------------------------------11111---------------------------1----------1-----1---1--1---------------4-11-11--211-----1---12------12---------------------------11-11------------------------1---1---------4111-221222123211-11213221211211111113333322-1111111111111111211211111-111111111111---------------326----1------1--2--------2-------12131-----222----------211122222433--------------------11------------2----------------------------11-111111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 62 STR:RPRED 18.1 SQ:SECSTR ###########################################################################################################################################################################################################################################################################ccccTTTHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHH#HHccccccHHHHHHHHHHH############# DISOP:02AL 1-3, 5-17, 342-343| PSIPRED cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccc //