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Thermobifida fusca YX (tfus0)
Gene : AAZ55529.1
DDBJ      :             putative ferrichrome transport system permease protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  108/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:346 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  63->339 1l7vA  f.22.1.1 * 6e-18 18.7 %
:HMM:SCOP  12->340 1l7vA_ f.22.1.1 * 1.4e-54 37.8 %
:RPS:PFM   45->339 PF01032 * FecCD 1e-12 26.4 %
:HMM:PFM   34->339 PF01032 * FecCD 8.9e-71 39.2 306/311  
:BLT:SWISS 45->339 YFHA_BACSU 4e-14 27.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55529.1 GT:GENE AAZ55529.1 GT:PRODUCT putative ferrichrome transport system permease protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1725546..1726586 GB:FROM 1725546 GB:TO 1726586 GB:DIRECTION + GB:PRODUCT putative ferrichrome transport system permease protein GB:PROTEIN_ID AAZ55529.1 GB:DB_XREF GI:71915627 LENGTH 346 SQ:AASEQ MTRPSALNLRVGSAVALPVHLRSLLWALLLAAALLLTVVATLSLGKLGIPLTDVADVLTGNASPVHMFVLHRLSGPRVTVAIGVGAALGMAGALFQSVTRNPLGSPDVIGVNWGASAGAALVALAFPGTVPVPLGALLGAVAAVLTVATVTGTGLRHPGRLVVAGIGVAAMSAAFTQFVVAALARDQASVLAAYVNGTLSARSWEHAATIWLVVALAVPLLAALAQPVALTEMGDELADSLGARATRTRTAAITLSVVLAAGAVSVAGPIAFVSLTAPQIARRLTRLAGPNLVVSALVGALILALADLAVQHFPFTDGLPVGIATLAVGGIYLGFLLVREWRRGAL GT:EXON 1|1-346:0| BL:SWS:NREP 1 BL:SWS:REP 45->339|YFHA_BACSU|4e-14|27.5|295/343| TM:NTM 8 TM:REGION 31->53| TM:REGION 78->100| TM:REGION 124->146| TM:REGION 161->183| TM:REGION 207->229| TM:REGION 252->274| TM:REGION 289->311| TM:REGION 317->339| SEG 21->44|lrsllwalllaaallltvvatlsl| SEG 80->94|vaigvgaalgmagal| SEG 114->125|gasagaalvala| SEG 134->155|lgallgavaavltvatvtgtgl| SEG 212->230|lvvalavpllaalaqpval| SEG 243->252|aratrtrtaa| SEG 255->268|lsvvlaagavsvag| RP:PFM:NREP 1 RP:PFM:REP 45->339|PF01032|1e-12|26.4|292/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 34->339|PF01032|8.9e-71|39.2|306/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 63->339|1l7vA|6e-18|18.7|273/324|f.22.1.1| HM:SCP:REP 12->340|1l7vA_|1.4e-54|37.8|320/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 131 OP:NHOMOORG 108 OP:PATTERN -------------------------------------------------------------------- ----111-22411-----------------------1211-1-21---1---2----111---23212132-------------------------------------------------------------------------1-2-1--------------1----1-------------------------11111-1--111--1-2--11111-1--1--------21---------------1------------------------------------------------------------------------------1-------------------1------------------------------------------------------------2--------------11--------1----------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------1111-1------1------------------------1111111-1111111111111111----------211111111111---------------112------------------------------------------------------1--------1-2--------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 344-346| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccc //