[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ55594.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  59/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:398 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   102->375 1eb8B PDBj 1e-06 13.6 %
:RPS:SCOP  40->373 1b6gA  c.69.1.8 * 1e-08 13.0 %
:HMM:SCOP  94->375 1hlgA_ c.69.1.6 * 1.3e-21 28.4 %
:HMM:PFM   93->153 PF12146 * Hydrolase_4 4.6e-06 36.7 60/79  
:HMM:PFM   131->292 PF00561 * Abhydrolase_1 2.5e-05 25.3 75/231  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55594.1 GT:GENE AAZ55594.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1795269..1796465 GB:FROM 1795269 GB:TO 1796465 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ55594.1 GB:DB_XREF GI:71915692 InterPro:IPR000379 LENGTH 398 SQ:AASEQ MSPSSHPDPAYPLRTTTPATVTSPPTSPTLRTTQDLPSPRPAPRTLTAMEVFMSSPHWQPDILGDGYRQHVLDLGADPDGEGRIVAVLVRRDIQPGETVHGAVLYVHGFSDYFFQTPLADFLAAHGLVFYALDLRKSGRARREGHTAHYVSDLALYDTELDRALGIISAAHPGLPVVVLAHSTGGLITSLWLDRRRAAGRVPPVAGLVLNSPWFDLQGKPSHRGILTQLLRVLAKIAPFRQLSTLPGVYGQTIHTSGTGEWDFDLTLKPLTGFPVTVGWLNAVRRGHARLHRGLDVGVPSLVLRSDRSDLSGVYSELSDRTDTVLDVTHIARWAGCLGGETTVVPIPGARHDVFLSLPQPREHAYQVLGSWLDQHGLSTRPAGDDKPAAEGGITPAAS GT:EXON 1|1-398:0| SEG 12->33|plrtttpatvtspptsptlrtt| SEG 194->206|rrraagrvppvag| SEG 300->311|slvlrsdrsdls| RP:PDB:NREP 1 RP:PDB:REP 102->375|1eb8B|1e-06|13.6|250/258| HM:PFM:NREP 2 HM:PFM:REP 93->153|PF12146|4.6e-06|36.7|60/79|Hydrolase_4| HM:PFM:REP 131->292|PF00561|2.5e-05|25.3|75/231|Abhydrolase_1| RP:SCP:NREP 1 RP:SCP:REP 40->373|1b6gA|1e-08|13.0|301/310|c.69.1.8| HM:SCP:REP 94->375|1hlgA_|1.3e-21|28.4|264/0|c.69.1.6|1/1|alpha/beta-Hydrolases| OP:NHOMO 67 OP:NHOMOORG 59 OP:PATTERN -------------------------------------------------------------------- -----1111111-111111-11--1111111111111111-----21-3---322-12--11111-1---1----------------------1-------------1----------------------------111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------1111111----------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 338 STR:RPRED 84.9 SQ:SECSTR #####################################ccccGGGGccccccccccEEEEccTTcTTcEEEEEEEEcccHHccccccccGGGGccccTTcccEEEEEccTGGGGTGTTHHHHHHHTTcEEEEEccTTcTTccccGGGcccHHHHTHHHHHHHHHHHHHHHccTTccEEEEEEGGGHHHHHHHHGGcGHHHHGGGEEEEEEEccccccccccTTHHHHHHHHHHHccccTTcEEEEEEcTTccEEEEEEEccHHHHHHTTcTTccHHHHHHHHHHcccccccHHHHHHcccccTTTGGGccEEEEEcTEEcTTcccccHHHHHHHHHHcccccEEEEcccccccHHHHcHHHHHHHHHHHHHHHHHH####################### DISOP:02AL 1-11, 378-392, 396-398| PSIPRED cccccccccccccccccccEEEcccccccccccHHccccccccccHHHHHHHHHcccccccccccccEEEEccccccccccccEEEEEEEEEcccccccccEEEEEEccccHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHHccccccccEEEEEccHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHccHHcccccccccccHHHHHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEcHHHHHHHHHHcccccEEEEccccEEEccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc //