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Thermobifida fusca YX (tfus0)
Gene : AAZ55595.1
DDBJ      :             putative uvrA-like protein
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  892/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.138.1c.37.1
:253 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->247 2vf8B PDBj 8e-51 44.0 %
:RPS:PDB   50->103 2bx9A PDBj 1e-04 35.0 %
:RPS:PDB   127->173 1d8jA PDBj 1e-04 19.1 %
:RPS:PDB   144->253 3b60A PDBj 4e-17 29.6 %
:RPS:SCOP  38->103 1d4cA1  a.138.1.3 * 3e-06 12.1 %
:RPS:SCOP  127->227 1f2t.1  c.37.1.12 * 2e-18 25.7 %
:HMM:SCOP  85->224 1ii8.1 c.37.1.12 * 4.3e-30 37.5 %
:HMM:PFM   93->172 PF00005 * ABC_tran 5.3e-14 36.8 68/118  
:HMM:PFM   45->81 PF00684 * DnaJ_CXXCXGXG 8.6e-07 29.7 37/79  
:HMM:PFM   143->213 PF02463 * SMC_N 6e-06 28.6 70/220  
:BLT:SWISS 1->251 UVRA_AQUAE 4e-54 47.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55595.1 GT:GENE AAZ55595.1 GT:PRODUCT putative uvrA-like protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1796553..1797314) GB:FROM 1796553 GB:TO 1797314 GB:DIRECTION - GB:PRODUCT putative uvrA-like protein GB:PROTEIN_ID AAZ55595.1 GB:DB_XREF GI:71915693 InterPro:IPR003439 LENGTH 253 SQ:AASEQ MVSIDQSAIRGSRRSNPATYTGLLDPIRKAFAKANGVKPSLFSANSEGACPACNGAGVIYTDLAMMAGVATVCETCEGKRFQASVLKYTLGGRTISDVLEMSVREAEEFFRAGEARLPAAHAILTRLADVGLGYLSLGQPLTTLSGGERQRLKLATHMGDKGGIYVLDEPTTGLHLADVAQLLALLDRIVDSGKSVIVIEHHQAVMAHADWIIDLGPGAGHEGGRVVFEGTPAELVAARSTLTGQHLADYVGA GT:EXON 1|1-253:0| BL:SWS:NREP 1 BL:SWS:REP 1->251|UVRA_AQUAE|4e-54|47.4|247/926| SEG 104->116|reaeeffragear| SEG 174->186|lhladvaqllall| BL:PDB:NREP 1 BL:PDB:REP 1->247|2vf8B|8e-51|44.0|243/835| RP:PDB:NREP 3 RP:PDB:REP 50->103|2bx9A|1e-04|35.0|40/53| RP:PDB:REP 127->173|1d8jA|1e-04|19.1|47/81| RP:PDB:REP 144->253|3b60A|4e-17|29.6|98/572| HM:PFM:NREP 3 HM:PFM:REP 93->172|PF00005|5.3e-14|36.8|68/118|ABC_tran| HM:PFM:REP 45->81|PF00684|8.6e-07|29.7|37/79|DnaJ_CXXCXGXG| HM:PFM:REP 143->213|PF02463|6e-06|28.6|70/220|SMC_N| RP:SCP:NREP 2 RP:SCP:REP 38->103|1d4cA1|3e-06|12.1|66/102|a.138.1.3| RP:SCP:REP 127->227|1f2t.1|2e-18|25.7|101/288|c.37.1.12| HM:SCP:REP 85->224|1ii8.1|4.3e-30|37.5|136/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1274 OP:NHOMOORG 923 OP:PATTERN ------------------------11111111111---1111111111-1111-------------11 2341432222222211111-12111311111123333233122232132222344212112232322244322224331123111111222223222--2222324242311111111111111222222222222222221113111111111111111111111111111111111111112121111111122222221121122122111112211122113222222231111111111111132223223133112223322332112221111111111111111111111111111111111111111111111112221333234212135111111311111111122211111111111111423111111111112111111111111111111111-221221121111111111111211111111111111111212222221112111111111111--11111111111111111111111112222222222322222224322221222323221122222322232222211111111111111111122121211111111111111112211111114412111111111111111-11111111111111211112121111111111111111112--12222------11121111111111111-11-1111111111111111111111111111111111111111111111111-111111111111--1111111111111112111211111-111111112211121111111222212222111111111111111111111111111132222221111111111111111111111111111111-1-11111111111111111111111111111223 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1----------1--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 100.0 SQ:SECSTR EEEEEccccHHHHTccHHHHHHHHHHHHHHHEEEETTEEEEccTTTcTTcEEEEEEcTTccEEEEEEETTHHHHHHHHHHccTTGGGccccccccccTTHHHHHHHHHccGGGHHHHHHHTcHHHHHHHHHHHGGGTcccHHHccHHHHHHHHHHHHHHHcccEEEEETTTccccHHHHHHHHHHHHHHcHTTcEEEEEcccGGGTTTccEEEEEHHTcEEETTEEEEEEcHHHHHHETTEEHTccHHHHHHH PSIPRED cEEEEcccccccccccccEEEEccHHHHHHHHHHcccccHHEEEcccccccccccccEEEEEEEccccccccccccccEEEcEEEEEEEEccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHccEEEEEcccccccccEEEEEccHHHHHHccccHHHHHHHHHHcc //