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Thermobifida fusca YX (tfus0)
Gene : AAZ55600.1
DDBJ      :             similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.79.7
:521 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   241->354 3cypB PDBj 1e-14 15.6 %
:RPS:SCOP  241->353 1oapA  d.79.7.1 * 3e-13 21.5 %
:HMM:SCOP  232->353 1r1mA_ d.79.7.1 * 2e-24 37.8 %
:HMM:PFM   246->342 PF00691 * OmpA 8.8e-20 36.2 94/97  
:BLT:SWISS 229->350 PORF_PSESY 9e-06 37.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55600.1 GT:GENE AAZ55600.1 GT:PRODUCT similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1800887..1802452) GB:FROM 1800887 GB:TO 1802452 GB:DIRECTION - GB:PRODUCT similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins GB:PROTEIN_ID AAZ55600.1 GB:DB_XREF GI:71915698 InterPro:IPR006664 LENGTH 521 SQ:AASEQ MARNRRVLSFVALAASGCLFASGCSVVMSWVSGDGPPVVREEFPYVKEGVIFQDTGQDATMRFAITGLERTDDYTVLHYEITYPDEFEGANRNLSMTYTLVDPMTGRVYRPYVDDEGMKYGSVSPTGNGMYPVFPGVTNEYRRYFPPLPPHVRQVTFVGSGLGAMTGIPVQDVDEERPEPENPNGGQHLSVDQPPAAGEKLTFDNRRPDEDAVAVEGWVESFVDSEIASVTRDGTTETISLHSDVMFEFDRADLTPEAEAVVRRAAETLERNVDPDHPEIIIIGHTDGIGTDAYNDDLSVRRAETVRNLLVEEMGTGYTYVVEGRGSREPIAREGGPDDEQARARNRRVEFSYTIRMPGGGEEETDDGLGVAGQHVSWPAPFTDDPGEVVASVERDGVRLDVYPLRRDGAFVVGTVTFTNLTDTPVDPGLTGFAVAGGPERFSKGTLGGFQVVEPESGLVRYVAQMNFGDGVYSAFAEEVHRLQPDRTYELVAVFSAPSSEVESVTLRAGPFGEIPDVPIE GT:EXON 1|1-521:0| BL:SWS:NREP 1 BL:SWS:REP 229->350|PORF_PSESY|9e-06|37.7|106/344| SEG 175->184|eerpepenpn| SEG 257->267|eaeavvrraae| SEG 280->292|iiiightdgigtd| SEG 359->364|gggeee| RP:PDB:NREP 1 RP:PDB:REP 241->354|3cypB|1e-14|15.6|109/129| HM:PFM:NREP 1 HM:PFM:REP 246->342|PF00691|8.8e-20|36.2|94/97|OmpA| RP:SCP:NREP 1 RP:SCP:REP 241->353|1oapA|3e-13|21.5|107/108|d.79.7.1| HM:SCP:REP 232->353|1r1mA_|2e-24|37.8|119/140|d.79.7.1|1/1|OmpA-like| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------1--------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 252 STR:RPRED 48.4 SQ:SECSTR ######################################################################################################cTTcTTGGGcccccccccEEEEEEEETTccccEEEEEEEEEcccEEcTTEcccccTTccccTTcccccccTTTTccEEcccEccTTEEccccTTccTTcEEEEcccTTEEEEEEEEEEEccTccTcccEEccEHHHTTcccEEcccTTcccccHHHHHHHHHHHHHHTTccTcTTcEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHTTccGGGEEEEEcTTcccccccccTTcHHHHHHHcEEEEEEE####################################################################################################################################################################### DISOP:02AL 1-5, 198-212, 220-231, 356-381| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccEEEccccEEEEEEcccccccccccccEEEccEEcccEEEEEcccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHcccHHHHccccccccHHHHHHHHHHHHHHHHccccccHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccEEEEcccEEEEEEcccEEcccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEEccccccccccccccHHHHHcccEEEEEEEEcccccHHHHccccccccccccccccccccccccEEEEEEEccEEcccccccccccEEEEEEEEEccccccccccccEEEEcccHHHHcccccccEEEEccccHHHHHHHHcccccHHHHHHHHHHHHccccccEEEEEEEccccccccEEEEEccccccccccccc //