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Thermobifida fusca YX (tfus0)
Gene : AAZ55626.1
DDBJ      :             CRISPR-associated protein, Cse4 family
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  113/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.8
:373 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   212->343 2amdB PDBj 1e-20 13.4 %
:RPS:SCOP  218->337 1iv8A2  c.1.8.1 * 3e-04 11.0 %
:RPS:PFM   4->329 PF09344 * Cas_CT1975 3e-65 49.4 %
:HMM:PFM   4->367 PF09344 * Cas_CT1975 1.8e-120 44.3 345/354  
:BLT:SWISS 3->359 YGCJ_ECOLI 1e-35 34.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55626.1 GT:GENE AAZ55626.1 GT:PRODUCT CRISPR-associated protein, Cse4 family GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1831823..1832944) GB:FROM 1831823 GB:TO 1832944 GB:DIRECTION - GB:PRODUCT CRISPR-associated protein, Cse4 family GB:PROTEIN_ID AAZ55626.1 GB:DB_XREF GI:71915724 InterPro:IPR010148 LENGTH 373 SQ:AASEQ MTFVDIHAIQTLPYSNINRDDLGSPKTVVYGGKERTRVSSQSWKRAVRHEVEARLGDKAVRTRRIISEIAKRLRERGWDADLADAGARQVVLSVGKKSGIKLEKEKDSEAPATSVLFYLPVPAIDELAAIADEHRDAVAKEAAKKTPKGILPADRITEVLKSRNVSVNLFGRMLAELPSTEVDGAVQFAHAFTVHGTTVEVDFFTAVDDIPKENDHGSGHMNAGQFSAGTFYRYANVNLDRLVENTGDAQTARTAVAEFLRAFLSTVPSGKQNATAAMTLPDLVHIAVRFDRPISFAPAFETALYGSDGYTLRACQELNNYAERLREVWPDDAIRGYATVENKTDLAALGERYDSYPALIDAMVAAAFEGERE GT:EXON 1|1-373:0| BL:SWS:NREP 1 BL:SWS:REP 3->359|YGCJ_ECOLI|1e-35|34.6|332/363| RP:PDB:NREP 1 RP:PDB:REP 212->343|2amdB|1e-20|13.4|127/304| RP:PFM:NREP 1 RP:PFM:REP 4->329|PF09344|3e-65|49.4|312/350|Cas_CT1975| HM:PFM:NREP 1 HM:PFM:REP 4->367|PF09344|1.8e-120|44.3|345/354|Cas_CT1975| RP:SCP:NREP 1 RP:SCP:REP 218->337|1iv8A2|3e-04|11.0|118/653|c.1.8.1| OP:NHOMO 124 OP:NHOMOORG 116 OP:PATTERN --------------------------------------------1--1-1------------------ ---1111---11-1----------------------1----11-----------------2----3-1-12-------------------------------------------------------1---1----1----11------11---1------------------------------1--1--------------------------------------------------------------------11-11---------------------------1-------------------------------------------------------------11--1------------------------------------------------------------1-----------------------1---------11111111211-2--2--------------------------------------------------------------------------------------1--------------------1-1---11---------1-11111--1---1------------------------------1------1-----------------------1---------111---111-1---11-11111--1-11-1--1--1--1--11---11111111111111-1-----1---------------------------1--11-------------------------1---------1---------------------1-1--1-------------------------11--------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 128 STR:RPRED 34.3 SQ:SECSTR ###################################################################################################################################################################################################################EEEEcTTccEEEEcT###TccccccccccccccccccccccHHHHHHHHHHHHTTccTTcccccccHHHHHHHHGGGTcccccHHHHHHTHHHHHHHTccHH#HHHHHHHHHHHHHccTTcccTTccccccc############################## DISOP:02AL 100-109, 145-148, 370-373| PSIPRED ccEEEEHHHHHccHHHccccccccccEEEEcccEEHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccEEEEHHHHHHHccccccccHHHEEEcccEEccEEEEcccEEcccccccccccccHHHHHHHHHHHHHHHHEEEEHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccEEcEEEcccHHHHHHccccccHHHHHHHHHHHHHccccc //