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Thermobifida fusca YX (tfus0)
Gene : AAZ55635.1
DDBJ      :             CRISPR-associated protein, Cse1 family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  24/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:555 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   9->494 PF09481 * CRISPR_Cse1 8e-60 40.6 %
:HMM:PFM   9->496 PF09481 * CRISPR_Cse1 4.1e-134 38.5 452/472  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55635.1 GT:GENE AAZ55635.1 GT:PRODUCT CRISPR-associated protein, Cse1 family GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1843065..1844732) GB:FROM 1843065 GB:TO 1844732 GB:DIRECTION - GB:PRODUCT CRISPR-associated protein, Cse1 family GB:PROTEIN_ID AAZ55635.1 GB:DB_XREF GI:71915733 LENGTH 555 SQ:AASEQ MTTDAPSFNLITQPWLPVQYRDGTEKELSLLEVFKQAPLLRRLVGDVPTQEFALLRLLLAILHDAIGGPEDSDEWAELWTQDEAEQQLPFDCIASYLEQYYHRFDLLHPTTPFFQVADLHTQKNDVFSLDRIVADVPNGELFFTMRARGVDRLSFAEAARWLVHAHAYDTSGIKSGAVGDPRAKGGKGYPQGVSWAGNLGGILVEGANLYETLLLNLVAFDTDNLIVTPEDRPAWRQPPTTAAPADDEELAQRPYGLCDLYTWQSRRIRLHYDADGVYGVLLAYGDPLAPHNKHNHEPMTAWRRSPAQEKKLKKPQVYLPREHDPTRSAWRGLGALVAGEASGAEQRGEAAAIVRPRILDWVARLVNEGFLPEDYFIRTRLIGVSYGTQQAVIDEIVDDHVAMAVVLLHERDSGLGRTAIKAVEDAEKAVTVLGGLAADLAKAAGADPETPRAAARDRGFGMLDGPFRTWLATLAPGTDATERRRAWQQKAHRIISDLGRQLVAEAGEAAWNGRVIKGKNTDVWLNASRADLKFRAELKKELPMATSEQTGEAAS GT:EXON 1|1-555:0| SEG 53->62|allrlllail| SEG 433->447|lgglaadlakaagad| RP:PFM:NREP 1 RP:PFM:REP 9->494|PF09481|8e-60|40.6|456/476|CRISPR_Cse1| HM:PFM:NREP 1 HM:PFM:REP 9->496|PF09481|4.1e-134|38.5|452/472|CRISPR_Cse1| OP:NHOMO 24 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- ---111-----1-1----------------------1----11-----------------1----1---11---------------------------------------------------------------------11------11---1------------------------------1------------------------------------------------------------------------1--1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 547-555| PSIPRED ccccccccccccccccEEEcccccEEEHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHcccccccccEEcccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEEcccccccEEEEEEccccccccccccccccHHcccHHHHHHcccccEEEEEccccccccHHHHHHHccccccccccccccHHHccHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccEEEcccccccEEccHHHHHHHHHHHHHHcccccccccccccc //