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Thermobifida fusca YX (tfus0)
Gene : AAZ55653.1
DDBJ      :             possible binding-protein-dependent transport protein
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  553/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:296 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->201 3fh6F PDBj 3e-12 26.9 %
:RPS:PDB   180->218 3dhwA PDBj 5e-09 25.6 %
:RPS:SCOP  38->279 2r6gG1  f.58.1.1 * 3e-15 15.0 %
:RPS:PFM   99->227 PF00528 * BPD_transp_1 7e-05 33.6 %
:HMM:PFM   88->274 PF00528 * BPD_transp_1 4.1e-22 18.6 167/185  
:BLT:SWISS 12->286 YESP_BACSU 3e-28 32.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55653.1 GT:GENE AAZ55653.1 GT:PRODUCT possible binding-protein-dependent transport protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1876623..1877513) GB:FROM 1876623 GB:TO 1877513 GB:DIRECTION - GB:PRODUCT possible binding-protein-dependent transport protein GB:PROTEIN_ID AAZ55653.1 GB:DB_XREF GI:71915751 LENGTH 296 SQ:AASEQ MTSATTRVQRPGALWAAPALIFFGIFGLAPIAIVAGLSFTTWDGLGNPEWAGLHNWRTLPSDKLVGSGLMITLTLTVLTWATQTPLALAFGAWAAGPQRIRAVVSTIFFLPLLLSTAAIALIWQALLDPTFGLPAQWSELTGLSANVLGDPDLALWAIVFVLLWQFLPFHMLLYQAAAKQIPASLYEAAEIDGASPLQRFWRITVPQLRHTIIASSVLMIVGSMTYFETVLLLTGGGPGTATRILPLHMYLKGFSAFEMGYASAIAVLLVAVGTGLSLLVVRVSGYSQMTSEREGV GT:EXON 1|1-296:0| BL:SWS:NREP 1 BL:SWS:REP 12->286|YESP_BACSU|3e-28|32.1|268/309| TM:NTM 6 TM:REGION 16->38| TM:REGION 60->82| TM:REGION 105->127| TM:REGION 146->168| TM:REGION 216->238| TM:REGION 263->285| SEG 229->242|tvllltgggpgtat| BL:PDB:NREP 1 BL:PDB:REP 14->201|3fh6F|3e-12|26.9|186/316| RP:PDB:NREP 1 RP:PDB:REP 180->218|3dhwA|5e-09|25.6|39/203| RP:PFM:NREP 1 RP:PFM:REP 99->227|PF00528|7e-05|33.6|119/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 88->274|PF00528|4.1e-22|18.6|167/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 38->279|2r6gG1|3e-15|15.0|227/284|f.58.1.1| OP:NHOMO 2732 OP:NHOMOORG 583 OP:PATTERN 11--1-11--------412321--71141-3-----------------------122-111521---- ---1d2-3333-1113333-322239333333255513464224L*W1AGG3NJL118--8559H2CKSG67444EA71---3-------------------------1---------------------------69977---75221311-11221212222221443--2-----2----CC2559B-953222222331132223OF774622354B19344344339*111111111111111-----331-23--11111--22---1-4-232323222222555666655552322232323332344---4443B3-39111111141492--1445U-342229--231--1G---774C2-1------1111112-EBB1--435533443344444B---6--4-1AP--WQQFZVNmjbQQ-----8B98668C85--------4--1--12-----------------------------1---2-132336887765133344884443335561122--2236-122326479-------3--------------1-1--12----1111---------222223----------1------------------225-----1-3----------------------1---------25651312222222222-22222223222212222224445511112111111111111116-212222--477777777777---------11111-76C---111--------1------------11112222122233323-----------111111113-43311111111111111-------------------12111-1-1---111111---111---6KB979Q8CA-2- --------------------------------------------------------------------------------------------------------------------------------------------------------------2------------------1----------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 203 STR:RPRED 68.6 SQ:SECSTR #############ccHHHHHHHHHHHTHHHHHHHHTTccccccccccccHHHHHTTHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccc##cccHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHH############################################################################## DISOP:02AL 1-5, 287-296| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //