[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ55666.1
DDBJ      :             ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  729/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:312 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  84->303 2r6gG1  f.58.1.1 * 8e-15 8.7 %
:HMM:PFM   123->307 PF00528 * BPD_transp_1 1.1e-31 28.2 174/185  
:BLT:SWISS 80->312 Y1313_MYCBO 2e-40 40.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55666.1 GT:GENE AAZ55666.1 GT:PRODUCT ABC transporter, permease protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1896339..1897277) GB:FROM 1896339 GB:TO 1897277 GB:DIRECTION - GB:PRODUCT ABC transporter, permease protein GB:PROTEIN_ID AAZ55666.1 GB:DB_XREF GI:71915764 LENGTH 312 SQ:AASEQ MSDLHPPASTPAPSASAASPDPVDRSAEHGQLRMVATRFLRHRMAMASLTVLVLTVLFAFLGPLLWPWDHTVHREILPNQPPSWAHPFGTTNAGHDVLGQLMRGTQQTLKVALTVSVLATAFGALWGAVAGYYRGWIDAVMMRIVDVLMVVPLLVAVAAISGNVRGGTTWWAVALIIALFSWTTIARVVRGVVLSLREQEFVEAARAAGASDARIVLHHLLPNAAGPTIVAATLLIATSILLEASMSFLGFGIQAPDISLGLMIDNARTAAFTRPWLFYPPGLFIVMICLTINFIGDGLRDALDPRQTITRR GT:EXON 1|1-312:0| BL:SWS:NREP 1 BL:SWS:REP 80->312|Y1313_MYCBO|2e-40|40.8|233/291| TM:NTM 6 TM:REGION 47->69| TM:REGION 108->130| TM:REGION 139->161| TM:REGION 172->194| TM:REGION 235->257| TM:REGION 278->300| SEG 6->20|ppastpapsasaasp| SEG 49->57|ltvlvltvl| SEG 145->159|vdvlmvvpllvavaa| SEG 204->213|aaraagasda| SEG 228->242|tivaatlliatsill| HM:PFM:NREP 1 HM:PFM:REP 123->307|PF00528|1.1e-31|28.2|174/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 84->303|2r6gG1|8e-15|8.7|218/284|f.58.1.1| OP:NHOMO 3042 OP:NHOMOORG 782 OP:PATTERN 44413121222211221222321133354142-----1------13-52-A93-5443112--12--1 1114C233344-4112222-2211292222224222175714-34B64234358532211442375577941111311313-411111--------2--------11--122222222222222111111111121466952216A32212221122------32113212------------A5433871423666664564546445A76663655324C521222222E6155555555655556333122222331-12111--331111122243333333111-11-------1222222222222221121111111C26244433331422222111153133A-1118853--282-3352144211----111-121GFL--37439-AAAAA997AAK-4484363BNL1-hNNTHH9VSJLKG4-115ABA6AA6CC1111111111122118--------------------------------1-1BB97B45565423333448844441445C539611223-232223B39O12112224--------111211346122242233331111111211----1311---1-------12212221112-12--553121111161111111111111111111--131-1------75I93867776766677-7777766777767777775ABAA93345555555555545455777667572-333333342333---11-1-1-----1746222-122111-312211111-211331221235461644429991----1---255566666656688--1--------------2111111111111116-11-1-1-11-1-1-111---1-1---32633ADB89211 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1-----------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 7-33, 308-312| PSIPRED ccccccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHHccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //