[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ55720.1
DDBJ      :             CBS
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  821/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.37.1
:462 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   228->344 3hf7A PDBj 9e-05 24.8 %
:BLT:PDB   318->345 3i8nA PDBj 2e-05 67.9 %
:BLT:PDB   366->449 2p3hA PDBj 4e-10 34.5 %
:RPS:PDB   139->349 3bp1B PDBj 3e-20 6.6 %
:RPS:PDB   357->413 3dedB PDBj 2e-07 30.9 %
:RPS:SCOP  221->346 1yavA3  d.37.1.1 * 2e-13 17.6 %
:RPS:SCOP  359->415 2rk5A1  d.145.1.4 * 4e-14 17.5 %
:HMM:SCOP  219->277 1nf7A3 d.37.1.1 * 1.7e-08 32.2 %
:HMM:SCOP  283->359 1pvmA2 d.37.1.1 * 2.6e-08 28.6 %
:RPS:PFM   23->205 PF01595 * DUF21 1e-23 37.9 %
:RPS:PFM   361->416 PF03471 * CorC_HlyC 7e-09 44.6 %
:HMM:PFM   14->208 PF01595 * DUF21 6.3e-45 33.3 180/183  
:HMM:PFM   360->450 PF03471 * CorC_HlyC 1.6e-22 39.2 79/81  
:HMM:PFM   227->279 PF00571 * CBS 5.2e-11 34.0 50/57  
:HMM:PFM   289->343 PF00571 * CBS 1.2e-07 30.9 55/57  
:BLT:SWISS 27->433 Y1842_MYCTU 5e-59 34.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55720.1 GT:GENE AAZ55720.1 GT:PRODUCT CBS GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 1958360..1959748 GB:FROM 1958360 GB:TO 1959748 GB:DIRECTION + GB:PRODUCT CBS GB:PROTEIN_ID AAZ55720.1 GB:DB_XREF GI:71915818 InterPro:IPR000644 LENGTH 462 SQ:AASEQ MCAMNVGVTILLGVLVVFLITAVTGYFVAQEFGFVAVDRSRLKARAAAGDTQARRVLDITSRTSFMLSGAQLGITVTGLLVGYVAEPMIGAGIGELLGGIGIPSGTGVAIGTVAALLFSTVVQMVFGELFPKNLAIARPEPVARRLALSTSIYLRLFGWLIWLFDRASMLLLKAVRITPVEDVQHAATPRDLERIVEESRDSGDLPAELSTLLDRSLDFHERTAEHAMIPRPQVTFVEADDPVSRVVELITTTGHSRFPVLTGVETVTGVVCLRDILGLDPATWETTRVADVARTAVLVPTSLPLPTLVARLHEANEQFACVVDEYGGLAGVVTTEDIAEELVGEIADEHDPEDESQARVIEDGNWLLPGALHIDEVERLLGHDLPAGDYETLGGLVITRLRRLPRPADRVTVTLPRHPGADDDEPDWVVNLVVEAVDRHVPETIRLELRESPQSSWTGVTA GT:EXON 1|1-462:0| BL:SWS:NREP 1 BL:SWS:REP 27->433|Y1842_MYCTU|5e-59|34.4|404/455| TM:NTM 4 TM:REGION 10->32| TM:REGION 73->95| TM:REGION 107->129| TM:REGION 152->174| SEG 6->21|vgvtillgvlvvflit| SEG 89->102|igagigellggigi| SEG 260->271|vltgvetvtgvv| SEG 295->310|tavlvptslplptlva| BL:PDB:NREP 3 BL:PDB:REP 228->344|3hf7A|9e-05|24.8|117/127| BL:PDB:REP 318->345|3i8nA|2e-05|67.9|28/118| BL:PDB:REP 366->449|2p3hA|4e-10|34.5|84/98| RP:PDB:NREP 2 RP:PDB:REP 139->349|3bp1B|3e-20|6.6|211/250| RP:PDB:REP 357->413|3dedB|2e-07|30.9|55/83| RP:PFM:NREP 2 RP:PFM:REP 23->205|PF01595|1e-23|37.9|169/184|DUF21| RP:PFM:REP 361->416|PF03471|7e-09|44.6|56/81|CorC_HlyC| HM:PFM:NREP 4 HM:PFM:REP 14->208|PF01595|6.3e-45|33.3|180/183|DUF21| HM:PFM:REP 360->450|PF03471|1.6e-22|39.2|79/81|CorC_HlyC| HM:PFM:REP 227->279|PF00571|5.2e-11|34.0|50/57|CBS| HM:PFM:REP 289->343|PF00571|1.2e-07|30.9|55/57|CBS| RP:SCP:NREP 2 RP:SCP:REP 221->346|1yavA3|2e-13|17.6|125/132|d.37.1.1| RP:SCP:REP 359->415|2rk5A1|4e-14|17.5|57/84|d.145.1.4| HM:SCP:REP 219->277|1nf7A3|1.7e-08|32.2|59/0|d.37.1.1|1/2|CBS-domain| HM:SCP:REP 283->359|1pvmA2|2.6e-08|28.6|77/78|d.37.1.1|2/2|CBS-domain| OP:NHOMO 1935 OP:NHOMOORG 847 OP:PATTERN ------------------------23322121-----------12112---11-------------12 2221423655533333333-36--3333333-66665355253543437443656233--444153359842222222112-2121222233-322---221121423-12111111111----2211-1-1212122211111221221222111111-11-22132332-11----1----3231111--344444443444444442-5435445322213333333343211111111111111111221-112212-1-1122222-1-1121111111111111111111111111111111111111111111111-1-231112222212123312222-122-22-13311-11-------11231-222311222233333323233311111111112-22312523233-3332434434331-1223142222222333333331332232311222222----22112222222221111-2121132212333333322223332222213333333311222323334312322153313431111111222322-11-123313232312221211222233231111111111111111111111-----2254321-222123444432534432432323--2422211-11132223444444444443-3444444444344444444333223333333333333333333344444441-3333333333331-21222222222211133332332222123322222222222523333344333432333333232332322222333331222333333333322222215111111122221222312111---------------------11111111111112 --------------------------------------------------------------------------------------------------------------------------------------------------------------2----------------1--17-----41---2-1-2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 309 STR:RPRED 66.9 SQ:SECSTR ##########################################################################################################################################cEEEEEEEEEEEEEEcTTccEEEEEEEEEEETTccEEEcHHHHHHTTTTcccccHHHHHHHHHHHHHHHHTcccEEEEEEGGGGTTcccccccEEccccccccccccccGGGGTTcEEEEEEEEEEEEEEEEEcccEEEEEcHHHHHHHHHTTTTccccHHHHHHHHHHHHHHTcccEEEEEEEEcccTTEEEEEEEEcccccccccccTcccGGG##cEEEcTTccEEEETcccHHHHHHHHTccccccccccHHHHHHHHHcccccTTcEEEEEccccGGTcccccccEEEEEEEEEETTEEEEEEEEE############# DISOP:02AL 1-3, 44-53, 182-187, 454-462| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccEEEEcccccccEEEEEcccccHHHHHHHHHHccccEEEEEcccccEEEEEEHHHHHHHHHcccccccHHHHccccEEEcccccHHHHHHHHHHccccEEEEEEccccEEEEEEHHHHHHHHHHHHcccccccccHHHEEEcccEEEEEccccHHHHHHHHcccccccccccHHHHHHHHHHcccccccEEEEcccEEEEEEcccccEEEEEEEEEEcccccEEEEEEEccccccccccccc //