[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ55724.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  26/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.25.1
:383 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  32->162 1vjxA_ a.25.1.1 * 1.4e-05 27.3 %
:RPS:PFM   170->363 PF01988 * VIT1 5e-07 27.7 %
:HMM:PFM   166->377 PF01988 * VIT1 3.8e-54 43.7 206/213  
:HMM:PFM   47->93 PF02915 * Rubrerythrin 1.3e-05 31.9 47/137  
:BLT:SWISS 216->272 PCL1_SCHPO 4e-04 42.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55724.1 GT:GENE AAZ55724.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1963400..1964551) GB:FROM 1963400 GB:TO 1964551 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ55724.1 GB:DB_XREF GI:71915822 LENGTH 383 SQ:AASEQ MGGEGTRAPAGGIADQEEGRGICMDQQHTASSDPSPATLRRWRRMLADEREEARAYRELAYRRDGEEREILLALAEAEARHVAYWERLLGDRVGKPRRGSWRMRALAFLARYLGWVLALALLQRAEHRIPYEAPDVPERIVADERIHAEVVRGLAVRSRSRLSGRLRAAVFGINDGLVSNIALVLGVVGGGATADTVLLTGLAGLLAGALSMAAGEYVSVSSQRELLAASVPDEAARESIPRLDAEDNELALVYRARGVPADEAQHRATTMLRLSRTGPPPELPGTTDPEVVGTGMSAAASSFVFFAVGAALPVLPFLAGMSGLAAVAVACTVTGIALLAVGAVVGVLSGSSPLRRALRQLTIGVGAAAATYLLGLLFNTVAT GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 216->272|PCL1_SCHPO|4e-04|42.9|56/100| TM:NTM 3 TM:REGION 294->316| TM:REGION 327->349| TM:REGION 360->382| SEG 46->64|ladereearayrelayrrd| SEG 66->80|eereillalaeaear| SEG 150->169|vvrglavrsrsrlsgrlraa| SEG 182->215|alvlgvvgggatadtvlltglagllagalsmaag| SEG 297->311|saaassfvffavgaa| SEG 337->352|allavgavvgvlsgss| SEG 364->377|gvgaaaatyllgll| RP:PFM:NREP 1 RP:PFM:REP 170->363|PF01988|5e-07|27.7|191/211|VIT1| HM:PFM:NREP 2 HM:PFM:REP 166->377|PF01988|3.8e-54|43.7|206/213|VIT1| HM:PFM:REP 47->93|PF02915|1.3e-05|31.9|47/137|Rubrerythrin| HM:SCP:REP 32->162|1vjxA_|1.4e-05|27.3|128/0|a.25.1.1|1/1|Ferritin-like| OP:NHOMO 27 OP:NHOMOORG 26 OP:PATTERN -------------------------------------------------------------------- ------11111111-----------------------111-----1--111111211111------1---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-13, 28-33, 128-131, 133-136, 142-160| PSIPRED cccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //