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Thermobifida fusca YX (tfus0)
Gene : AAZ55737.1
DDBJ      :             sugar-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  80/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:442 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   49->434 2uvjA PDBj 4e-24 22.8 %
:RPS:PDB   48->440 1a7lA PDBj 5e-29 15.6 %
:RPS:SCOP  48->441 1urdA  c.94.1.1 * 7e-30 11.7 %
:HMM:SCOP  34->440 1eljA_ c.94.1.1 * 2.8e-71 27.3 %
:RPS:PFM   57->351 PF01547 * SBP_bac_1 2e-11 29.8 %
:HMM:PFM   61->350 PF01547 * SBP_bac_1 8.6e-32 25.0 280/314  
:BLT:SWISS 49->437 YESO_BACSU 2e-52 29.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55737.1 GT:GENE AAZ55737.1 GT:PRODUCT sugar-binding protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(1980456..1981784) GB:FROM 1980456 GB:TO 1981784 GB:DIRECTION - GB:PRODUCT sugar-binding protein GB:PROTEIN_ID AAZ55737.1 GB:DB_XREF GI:71915835 LENGTH 442 SQ:AASEQ MRAESPSGRPSVRLRSRTLPLAAALTALTMVVSGCGGQGGDSADGVVELRFSWWGSDERHAMTQEVIELFEEQNPGIKIVGEYTDWASYWDKLATTTAAGDAPDIITQEERYLREYAERGALLDLSQLDGLDLSKIDPLVAESGDLDGATYGVATGVNAYAILADPQAFADAGVDMPDDDTWTWDDYVKIAAEISEKSNGEIVGTQAMGYNETGFAIFARQHGESLYTEDGKLGFSKKTLEKWFQYTVDLLESGAQPGASESVEIEAGGPDQSVLATNKGAMAHFWTNQLGAISASSGREIELLRYPGETEHERTGMYFKPAMYYSISAGTEHPEEAAKFVDFLLNSEEAAAILLADRGLPANVEVRESIVDALPEADRRSAEFLAEIEGTIVDGNPPPPIGAGQVVDIIKRINDDLMFGRLTPAEAADRFIKEVEDATKAS GT:EXON 1|1-442:0| BL:SWS:NREP 1 BL:SWS:REP 49->437|YESO_BACSU|2e-52|29.6|382/427| SEG 13->29|rlrsrtlplaaaltalt| SEG 31->47|vvsgcggqggdsadgvv| SEG 122->134|lldlsqldgldls| SEG 178->186|dddtwtwdd| BL:PDB:NREP 1 BL:PDB:REP 49->434|2uvjA|4e-24|22.8|378/404| RP:PDB:NREP 1 RP:PDB:REP 48->440|1a7lA|5e-29|15.6|365/380| RP:PFM:NREP 1 RP:PFM:REP 57->351|PF01547|2e-11|29.8|265/282|SBP_bac_1| HM:PFM:NREP 1 HM:PFM:REP 61->350|PF01547|8.6e-32|25.0|280/314|SBP_bac_1| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF01547|IPR006059| GO:PFM GO:0006810|"GO:transport"|PF01547|IPR006059| RP:SCP:NREP 1 RP:SCP:REP 48->441|1urdA|7e-30|11.7|369/370|c.94.1.1| HM:SCP:REP 34->440|1eljA_|2.8e-71|27.3|373/380|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 133 OP:NHOMOORG 80 OP:PATTERN -------------------------------------------------------------------- ----2---------------------------------------372-----475-------1-1--12-1----------------------------------------------------------------------------1-111-----------1---111------------------21-1-----------------5211-1----------1-----15-----------------------------------------------1----------------------------------1---111-21--1---------------1-11-------------------------1---------------------------------------------1---322122222222------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------112-1-------------------------------11133-------------------1---------111111111111-----------------1---------------------------------------------------------------------------------------------------------------------------------2----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 88.9 SQ:SECSTR ###############################################cEEEEccTTccHHHHHHHHHHHHHHHcHcccEEEEEEccTTHHHHHHHHGGGTccccEEEEEGGGHHHHHHTTccccccccHHHHTHTccHHHHGGGEETTEEccEEEEEEccEEEEETTTccccccccTTTTcccHHTHHHHHHHHHTTTccccccccccHHHHHHHHHHTTEcccccccccccEEcccHHHHHHHHHHHHHHHTTcccTTccHHHHEcHHHHHHHHHTTcccEEEEcGGGHHHHHHHHTccEEEEcccccTTcccccEEEEEEEEEEEcTTcTTHHHHHHHHHHTTccHHHHHHHHHHccccEEccHHHHHHHTHHTTcHTcHHHHHHHHHHHHcEEccccTTHHHHHHHHHHHHHHHHTTcccHHHHHHHHHccHHHHcc## DISOP:02AL 1-16, 37-45| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEEEccHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccEEEEEEHHHHHHccccccccccccHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHcccEEEEEcccHHHHHHHHcccccEEEEEcccccccccccEEEEccEEEEEEcccccHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcc //