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Thermobifida fusca YX (tfus0)
Gene : AAZ55827.1
DDBJ      :             calcium-binding EF-hand
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
a.39.1
:127 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   58->121 1h4bA PDBj 3e-10 44.4 %
:RPS:PDB   61->122 1blqA PDBj 5e-13 37.1 %
:RPS:SCOP  60->122 1k9uA  a.39.1.10 * 7e-14 33.9 %
:HMM:SCOP  38->122 1s6jA_ a.39.1.5 * 5.7e-13 34.1 %
:HMM:PFM   64->87 PF00036 * efhand 2.9e-06 33.3 24/29  
:HMM:PFM   98->123 PF00036 * efhand 1.9e-08 50.0 26/29  
:BLT:SWISS 54->122 CML14_ORYSJ 5e-11 42.0 %
:PROS 70->82|PS00018|EF_HAND_1
:PROS 106->118|PS00018|EF_HAND_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55827.1 GT:GENE AAZ55827.1 GT:PRODUCT calcium-binding EF-hand GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2092716..2093099 GB:FROM 2092716 GB:TO 2093099 GB:DIRECTION + GB:PRODUCT calcium-binding EF-hand GB:PROTEIN_ID AAZ55827.1 GB:DB_XREF GI:71915925 InterPro:IPR002048 LENGTH 127 SQ:AASEQ MNSHNAHRIAWENRKIGPDFSPCPAVLARGQAAVGYRSSTYRAHPHSATSGKGTAVADTNEYAATFNLVDSDGDQRISARELGRLMEVLGSPITLDQAEEAVRSIDSDGDGLISLEEFAAYLESARN GT:EXON 1|1-127:0| BL:SWS:NREP 1 BL:SWS:REP 54->122|CML14_ORYSJ|5e-11|42.0|69/173| PROS 70->82|PS00018|EF_HAND_1|PDOC00018| PROS 106->118|PS00018|EF_HAND_1|PDOC00018| BL:PDB:NREP 1 BL:PDB:REP 58->121|1h4bA|3e-10|44.4|63/84| RP:PDB:NREP 1 RP:PDB:REP 61->122|1blqA|5e-13|37.1|62/90| HM:PFM:NREP 2 HM:PFM:REP 64->87|PF00036|2.9e-06|33.3|24/29|efhand| HM:PFM:REP 98->123|PF00036|1.9e-08|50.0|26/29|efhand| RP:SCP:NREP 1 RP:SCP:REP 60->122|1k9uA|7e-14|33.9|62/76|a.39.1.10| HM:SCP:REP 38->122|1s6jA_|5.7e-13|34.1|85/0|a.39.1.5|1/1|EF-hand| OP:NHOMO 12 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------11--------------------1--------------------------1------------------1222---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 78 STR:RPRED 61.4 SQ:SECSTR #################################################HccccEEccHHHHHHHHHHHccccccccTHHHHHHHHHTTTccccHHHHHTTTTTTcccccccccHHHHHHHHHcccc DISOP:02AL 1-3, 22-61, 126-127| PSIPRED ccccccccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccEEcHHHHHHHHHHHcccccHHHHHHHHHHHccccccEEcHHHHHHHHHHccc //