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Thermobifida fusca YX (tfus0)
Gene : AAZ55853.1
DDBJ      :             putative peptide transport system permease protein
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  786/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:337 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  199->334 2r6gG1  f.58.1.1 * 4e-08 5.2 %
:RPS:PFM   213->334 PF00528 * BPD_transp_1 7e-04 29.5 %
:HMM:PFM   135->334 PF00528 * BPD_transp_1 1.1e-37 33.3 183/185  
:BLT:SWISS 1->334 Y209_BRUME 7e-50 37.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55853.1 GT:GENE AAZ55853.1 GT:PRODUCT putative peptide transport system permease protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2121363..2122376) GB:FROM 2121363 GB:TO 2122376 GB:DIRECTION - GB:PRODUCT putative peptide transport system permease protein GB:PROTEIN_ID AAZ55853.1 GB:DB_XREF GI:71915951 LENGTH 337 SQ:AASEQ MLRYILRRLGASVILLLVVTLMTFVIFYVVPRLAGRTTEQLATMYVGRAPTEAAIQATIKRLNLDQPLIIQFWEFIKGIVLGADYTFGNDVVHCAAPCFGYSFQTYQEVFPAILERLPITFSLGLGAAVLWLVGGVAVGVISAVKKGSIFDRISMGLALGAVSLPIFFTGQLALAFLVHDWGLFPNARYTPFTEDPIAWASGLLLPWLTLAFLHAAQYARQTRAGMLETMGEDYIRTARAKGLKESRVILKHGLRPTLTPILTIFGLDIGLVLGGAVLTEQVYSLNGIGRFAVTAIVQSDLPVILGVTLFGAFFIVLCNLAVDLLYPLVDPRVRTAR GT:EXON 1|1-337:0| BL:SWS:NREP 1 BL:SWS:REP 1->334|Y209_BRUME|7e-50|37.2|312/315| TM:NTM 7 TM:REGION 12->34| TM:REGION 93->115| TM:REGION 123->144| TM:REGION 157->179| TM:REGION 196->218| TM:REGION 268->290| TM:REGION 300->322| SEG 123->147|lglgaavlwlvggvavgvisavkkg| RP:PFM:NREP 1 RP:PFM:REP 213->334|PF00528|7e-04|29.5|122/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 135->334|PF00528|1.1e-37|33.3|183/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 199->334|2r6gG1|4e-08|5.2|135/284|f.58.1.1| OP:NHOMO 3555 OP:NHOMOORG 848 OP:PATTERN 4441313255555453452222113336435212---1-----113-42-EA5-54432132314-11 -113D443444-3122322-22112A2222224333276A1A186DB435548A732511552395987A42333633323-411111--------2--------11--122222221221111211111111121465952216A3322333221111111132215322111111111111A4433981423666664564546445A76663655314B521222222E6155545555555555333222222332-12111--33111112234333333311112211111112222222222222231111211111C26244434541422222111143153C-111BA63--282-3462164311----1121131HGO115854B19AAA9AA8AAL-34C32A3DQP1-mRRXJJEXTMOOK4-115CD96997DE1111111123322219-------------------------------11--CFBCC68888644555559955552567E64A7113342363353D5DQ241142242-------111221346132352233331111111211----14111111------112222212213-1211653121111141111111211111121111--13311------76KC2987777777777-7777777777777676776BCBCA3366666666666666666876666674-666666656666---111111111111748333-1222212412222222121235322223658164441ABA1----1---246566666656688--1-------------12111111222122116-111111-1-11111111112111---438549E988212 -----------------------------------------------------------------------------------------------------------------1--------------------------------------------2----2---------1-----------1--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 336-337| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHcccc //