[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ55880.1
DDBJ      :             ABC-type antimicrobial peptide transport system ATPase component
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:252 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   16->231 1l2tB PDBj 5e-50 44.9 %
:RPS:PDB   15->237 3b5jA PDBj 6e-48 24.7 %
:RPS:SCOP  16->229 1sgwA  c.37.1.12 * 3e-42 19.9 %
:HMM:SCOP  18->232 1ii8.1 c.37.1.12 * 5.1e-64 41.6 %
:RPS:PFM   59->181 PF00005 * ABC_tran 2e-19 47.4 %
:HMM:PFM   59->181 PF00005 * ABC_tran 2.8e-25 38.8 116/118  
:HMM:PFM   44->69 PF03193 * DUF258 4e-05 26.9 26/161  
:BLT:SWISS 18->234 MACB_BDEBA 3e-52 44.4 %
:PROS 154->168|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55880.1 GT:GENE AAZ55880.1 GT:PRODUCT ABC-type antimicrobial peptide transport system ATPase component GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2154213..2154971 GB:FROM 2154213 GB:TO 2154971 GB:DIRECTION + GB:PRODUCT ABC-type antimicrobial peptide transport system ATPase component GB:PROTEIN_ID AAZ55880.1 GB:DB_XREF GI:71915978 InterPro:IPR001687 InterPro:IPR003439 InterPro:IPR003593 LENGTH 252 SQ:AASEQ MPTPPAPSGTAEPHAVVVQGLTKVYPTGGEPVRALDGVDVSFARGAFTAIMGPSGSGKSTLMHCMAGLDTPTSGSVRLGATELTALSDKQLTLLRRDRIGFVFQSFNLLPMLTARQNILLPSQISKRKVDPERFRHIVEVTGLADRLEHLPAKLSGGQQQRVAVARALVGSPEVLYADEPTGNLDSRSGAEVLSFLRDSVRELGQTIVMVTHDPIAASYADRVVFLRDGRVVDDVTHPTPQLILDRLAGLEG GT:EXON 1|1-252:0| BL:SWS:NREP 1 BL:SWS:REP 18->234|MACB_BDEBA|3e-52|44.4|216/650| PROS 154->168|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 16->231|1l2tB|5e-50|44.9|216/232| RP:PDB:NREP 1 RP:PDB:REP 15->237|3b5jA|6e-48|24.7|219/243| RP:PFM:NREP 1 RP:PFM:REP 59->181|PF00005|2e-19|47.4|116/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 59->181|PF00005|2.8e-25|38.8|116/118|ABC_tran| HM:PFM:REP 44->69|PF03193|4e-05|26.9|26/161|DUF258| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 16->229|1sgwA|3e-42|19.9|196/200|c.37.1.12| HM:SCP:REP 18->232|1ii8.1|5.1e-64|41.6|209/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 54220 OP:NHOMOORG 1173 OP:PATTERN XXMCQNLJXWWSWSbLjIQSOTRY*QUkoajXICDEDBHGGFDXdUXqNR**l9TcSXYNTJKFa19A VduS*hihssvXiTbYZRQ-QpBBc*RRRRRR*vux****Z*h****r*yoU***TUnCD***q*y****jgeee*hgeQ*irDBEACQSQL6NFJI--FFSJLJhNbQT89AAAA9BDCCCCCJWSOWbPPXYbWnvv**NMK*dxnrzifmfmVXVNPNRKfjar***cKSHKJIJTHLIJmbiTTwoCYgx********************z***io***jpxvwrqt**Zoppppljmnooommagdac*iYe**dPdWkwvTU**cWPZklkimtsvvvq*zz*uxstpouypttefeddfegggfde*onhggpnqio***********k*nq***alli*rkwy*isTO***mYgjoTclcqjPfblNeXWWNMPMLOeb***eWw****************-z**wo*y***XC**************KMP**********ZYZZZZZZ*hnLWrc*7766655577578ABC9ABA8A99A96B7KFGMFG************************u********CO**s*r*rz******fusOZLWqYJKJJKIIUQTdumf**UgZ*uatwhftLgYcXXckXcfdefy*c*JMQSHOONPNJCEDFEEFCEIWGGJVUvtzUzWiMYQ*RaadZPYhYVVaWYcbbgc5-FLaRP321333****b**********z*-**z**********wxzxwx*****rrlrtnqqtsrsspqsqqp*vptwwuyX3************33JIDGDDENOQOOL*u*ZZYZabMRUPOXQWgPRTSRITIPW*i*************p***GFFDEGFEFLksq*xxyyx*****UUSNPONNPNFEEE77OWRQJKLMA9798999*CWEACDC-FFDFIEEQQNBENEHGAAAamxYYs*trrEhQ 3322qjK-eJAATfXOIOHPTcVZYZRKKGKGLUQOISPPLQQIHGOLQcXVoeRRTHJKLLEAD69A2CD7GBGAB2CBEHEEJH48-JQCIEFMCCBDEAHRTP6WvszcfZqelNJLHKXPxsC*F**q3vVrLMGEjGLmbHQJHBdCB*HcVQzOu*OyRkI*el*cmpKIPKM*JMLQX****J**PQ****j ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-11| PSIPRED ccccccccccccccEEEEEEEEEEEccccEEEEEEccccEEEcccEEEEEEccccccHHHHHHHHHHcccccccEEEEccEEcccccHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHcccccccccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHccEEEEEEccEEEEEcccccHHHHHHHHHHHcc //