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Thermobifida fusca YX (tfus0)
Gene : AAZ55884.1
DDBJ      :             regulatory protein, DeoR
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  540/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.124.1
:264 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->57 1i1gA PDBj 7e-04 31.1 %
:RPS:PDB   24->262 3dlxB PDBj 6e-24 12.0 %
:RPS:SCOP  10->65 1lvaA4  a.4.5.35 * 2e-10 16.1 %
:RPS:SCOP  84->258 1t5oA  c.124.1.5 * 3e-17 8.9 %
:HMM:SCOP  9->63 1stzA1 a.4.5.51 * 5.8e-10 45.5 %
:HMM:SCOP  76->239 1lk5A1 c.124.1.4 * 7.7e-25 36.1 %
:RPS:PFM   13->65 PF08220 * HTH_DeoR 6e-07 49.1 %
:RPS:PFM   84->235 PF00455 * DeoR 7e-21 36.8 %
:HMM:PFM   84->235 PF00455 * DeoR 8.4e-36 37.5 152/157  
:HMM:PFM   13->65 PF08220 * HTH_DeoR 1e-17 47.2 53/57  
:BLT:SWISS 12->251 LACR_LACLA 6e-30 32.6 %
:PROS 13->47|PS00894|HTH_DEOR_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55884.1 GT:GENE AAZ55884.1 GT:PRODUCT regulatory protein, DeoR GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2158930..2159724) GB:FROM 2158930 GB:TO 2159724 GB:DIRECTION - GB:PRODUCT regulatory protein, DeoR GB:PROTEIN_ID AAZ55884.1 GB:DB_XREF GI:71915982 InterPro:IPR001034 LENGTH 264 SQ:AASEQ MTVQDRPAFAARRRELIVELLRAHGTMALRDLAHELQVSEVTVRRDVRVLEAQGVLDRRRGGASLPGYQGRRSQEQTTTPELVAIARTAATLVAEGDAIVLGPGEATAALAAELVRRRGLTVVTNSLRNAQILADAPEVEVVVTGGILRGADLALVGGAAEQALEGLRVRRAFLTGHGVTAERGVSTSNAAIAGVDQALAACAEEVIVLVDHTRLGTDTMVQTVAPESIEHLVTDSNADPEVLLTFEDMGTTVHVAVPDPDRGR GT:EXON 1|1-264:0| BL:SWS:NREP 1 BL:SWS:REP 12->251|LACR_LACLA|6e-30|32.6|239/255| PROS 13->47|PS00894|HTH_DEOR_1|PDOC00696| BL:PDB:NREP 1 BL:PDB:REP 13->57|1i1gA|7e-04|31.1|45/140| RP:PDB:NREP 1 RP:PDB:REP 24->262|3dlxB|6e-24|12.0|234/465| RP:PFM:NREP 2 RP:PFM:REP 13->65|PF08220|6e-07|49.1|53/56|HTH_DeoR| RP:PFM:REP 84->235|PF00455|7e-21|36.8|152/157|DeoR| HM:PFM:NREP 2 HM:PFM:REP 84->235|PF00455|8.4e-36|37.5|152/157|DeoR| HM:PFM:REP 13->65|PF08220|1e-17|47.2|53/57|HTH_DeoR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF08220|IPR001034| GO:PFM GO:0005622|"GO:intracellular"|PF08220|IPR001034| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF08220|IPR001034| RP:SCP:NREP 2 RP:SCP:REP 10->65|1lvaA4|2e-10|16.1|56/60|a.4.5.35| RP:SCP:REP 84->258|1t5oA|3e-17|8.9|169/340|c.124.1.5| HM:SCP:REP 9->63|1stzA1|5.8e-10|45.5|55/87|a.4.5.51|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 76->239|1lk5A1|7.7e-25|36.1|144/150|c.124.1.4|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 2053 OP:NHOMOORG 546 OP:PATTERN ------------------------2--1---------------------------------------- 33--9223445111-------3---5------322212231--271--13336461-4--2136758667311111112---1--------1--------13--14-6-A--------------------------22211----------------------------1-------------21---21-31433333334243333375442434411113236666665A1222222222222224322342-158--2-144--771311--3433343333333333333333334444444444444432111333551167332334343413--234222-3-2121----1--1--42226221--12--------1-113---1311144444444446---1--1-219--B665456A98542----3225145432111111115222---4-------------------------------1---111113446433333344763333125362232--1211-1111-1325-------411111111----1---2---12--1---1-------11-----1-----------------------------5382-1111233111111122211111111-------------7477563A99CACBCAA-9BAA9AAAAA9DA9AABA5ECE45432C8CCCBCBBABBBCCBA987AA983-755455455555---------------136444747223225775----------3133232534222222455----------333744444533672211111----------4---------------------------1---------------41--13111-11 -------------2------------------------------------------------------------------------------------------------------------------------------------------------1----1------4---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 264 STR:RPRED 100.0 SQ:SECSTR ccHHHccHHcEEEEEEcTTccEEcTTHHHHTTcEEEEEEEEcEEEcTTcccGGGccccGGGccEEEEcccccccccccccHHHHHHHHHGGGccTTEEEEEcTTHHHHHHGGGccTTccEEEEETTTEEEEcccGGccTTcccTTccEEEEEEEccHHHHHHHHHTTcccEEEEcccEEETTccEEcccccccTTHHHHTccTTcEEEEEGEEcEEccccccccccccccEEEcccEEEEEEETEETTTEEEEEEEcTTccHTE DISOP:02AL 1-10, 68-78, 259-264| PSIPRED cccccccccHHHHHHHHHHHHHHcccEEHHHHHHHHcccHHHHHHHHHHHccccEEEEEcccEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHccccEEEEEccHHHHHHHHcccccEEEEEccEEEccccEEEcHHHHHHHHHccccEEEEEEcEEccccccccccHHHHHHHHHHHHHcccEEEEEEccccccccEEEEEccccccEEEEcccccHHHHHHHHHcccEEEEEcccccccc //