[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ55897.1
DDBJ      :             similar to iron(III) dicitrate transport permease; RBL00804
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  71/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.92.2
:361 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   78->191 3eixA PDBj 4e-10 42.0 %
:RPS:PDB   70->359 2chuB PDBj 1e-29 16.8 %
:RPS:SCOP  72->359 2chuA1  c.92.2.4 * 2e-29 18.9 %
:HMM:SCOP  91->358 1efdN_ c.92.2.1 * 1.3e-43 33.3 %
:RPS:PFM   145->336 PF01497 * Peripla_BP_2 3e-10 30.4 %
:HMM:PFM   100->333 PF01497 * Peripla_BP_2 1.2e-32 25.8 225/238  
:HMM:PFM   31->81 PF10099 * RskA 0.001 27.5 51/175  
:BLT:SWISS 78->355 YFIY_BACSU 2e-19 35.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55897.1 GT:GENE AAZ55897.1 GT:PRODUCT similar to iron(III) dicitrate transport permease; RBL00804 GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2171635..2172720) GB:FROM 2171635 GB:TO 2172720 GB:DIRECTION - GB:PRODUCT similar to iron(III) dicitrate transport permease; RBL00804 GB:PROTEIN_ID AAZ55897.1 GB:DB_XREF GI:71915995 LENGTH 361 SQ:AASEQ MGLGKPSTTLYRSLRQGLPNLIVVVGHWPPTRRKRSRVQQKALRSGLVLGAGALALSLTLTACGDAQEAADTPAQGDTVTVETDYGTVEIPADPQRIVALEFGTEVVLEAGIEPVGVIEPVATLYTAEEFEQLSTYPVVQSASLEINMEAIAEAQPDLIIGGVRVESHDEYVGIREDLEKIAPTVFFDFDGAGSGLRNMTLELSRVVGDGERAEAEQQRFEERVEEISTAYADQLADTTFALVFGVDGEFAVVNTNAWGGEILHTLGAKQSKAQQPAGENFAAFYSYEEIDELSDADVIFYETDAQENPDPFTEALLEQKLWQSLPAVEAGQVHPLRYSAARTYAQANIVLDQIEEVLKGL GT:EXON 1|1-361:0| BL:SWS:NREP 1 BL:SWS:REP 78->355|YFIY_BACSU|2e-19|35.2|264/325| SEG 42->62|alrsglvlgagalalsltlta| SEG 211->226|eraeaeqqrfeervee| BL:PDB:NREP 1 BL:PDB:REP 78->191|3eixA|4e-10|42.0|100/287| RP:PDB:NREP 1 RP:PDB:REP 70->359|2chuB|1e-29|16.8|274/283| RP:PFM:NREP 1 RP:PFM:REP 145->336|PF01497|3e-10|30.4|184/235|Peripla_BP_2| HM:PFM:NREP 2 HM:PFM:REP 100->333|PF01497|1.2e-32|25.8|225/238|Peripla_BP_2| HM:PFM:REP 31->81|PF10099|0.001|27.5|51/175|RskA| GO:PFM:NREP 2 GO:PFM GO:0005381|"GO:iron ion transmembrane transporter activity"|PF01497|IPR002491| GO:PFM GO:0006827|"GO:high-affinity iron ion transport"|PF01497|IPR002491| RP:SCP:NREP 1 RP:SCP:REP 72->359|2chuA1|2e-29|18.9|270/283|c.92.2.4| HM:SCP:REP 91->358|1efdN_|1.3e-43|33.3|255/262|c.92.2.1|1/1|"Helical backbone" metal receptor| OP:NHOMO 99 OP:NHOMOORG 71 OP:PATTERN -------------------------------------------------------------------- -----1--111--------------------------412---1-----1--------------311--51------------------------------------------------------------------11-------1-----------------1---3-----------------------1-11111221-2212221133-11121111--1------24-111111-1111111----1-------------------------------------------------------------------------1---------1------1-1------------------------------------------------------------------------1---------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 80.9 SQ:SECSTR ####################################################################ccEEEEcccEEEEEccccEEEEEcccccEEEccHHHHHHHHTTcGGGEEccEccGGGccGGGGGGTTccccccccccccHHHHHHTcccEEEEETTTTEcTTTGGGHHHHHTTccEEEccccTTcHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHTccTTcTccEEEEEEEETTEEEEEcTTcTTTHHHHTTccEEcHTTGcccccccEEEcHHHHHHHcccEEEEEEHHHHHTccccHHHHTccHHHHHcHHHHTTcEHHHTTTTTccHHHHHHHHHHHHHHHcc# DISOP:02AL 1-6, 63-79| PSIPRED cccccccHHHHHHHHcccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccEEEEcccccEEEEEcccHHHHHHcccEEEEEEccccccccHHHHHHHccccEEccccccccHHHHHHccccEEEEEccccccHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccEEEEEcccccHHHHHHHHcccccHHHccccccccccccHHHHHHHccccEEEEEccccccHHHHHHHHHHccHHHcccHHHccEEEEEEccccccHHHHHHHHHHHHHHHHcc //