[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ55903.1
DDBJ      :             isochorismatase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  201/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
c.33.1
:221 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->207 1nf9A PDBj 1e-57 52.7 %
:RPS:PDB   30->202 2a67A PDBj 2e-27 17.3 %
:RPS:SCOP  2->207 1nf8A  c.33.1.3 * 2e-51 52.0 %
:HMM:SCOP  1->210 1nbaA_ c.33.1.3 * 6.7e-60 40.0 %
:RPS:PFM   31->190 PF00857 * Isochorismatase 2e-14 36.5 %
:HMM:PFM   32->205 PF00857 * Isochorismatase 6.3e-41 32.4 173/174  
:BLT:SWISS 1->218 DHBB_BACSU 2e-57 47.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55903.1 GT:GENE AAZ55903.1 GT:PRODUCT isochorismatase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2192529..2193194) GB:FROM 2192529 GB:TO 2193194 GB:DIRECTION - GB:PRODUCT isochorismatase GB:PROTEIN_ID AAZ55903.1 GB:DB_XREF GI:71916001 InterPro:IPR003881 LENGTH 221 SQ:AASEQ MSLPAITPYPLPTVDQLPANRAEWQITPARAVLLVHDMQRYFLRPYAESADPLRGVLTNISTLADTCRTLGIPVIYTVKPGGMDPAQRGLELHFWGRGMSATDEHTAIDTRIAPRPTDLVVVKARYSAFVGTDLAARLADLNRDQIIVTGVYAHIGCLLTAADAFMRDIQPFLVADATADFSAEEHRFALTYAATRCAMVTSTADALAALRSARVDVETGG GT:EXON 1|1-221:0| BL:SWS:NREP 1 BL:SWS:REP 1->218|DHBB_BACSU|2e-57|47.7|218/312| BL:PDB:NREP 1 BL:PDB:REP 3->207|1nf9A|1e-57|52.7|203/207| RP:PDB:NREP 1 RP:PDB:REP 30->202|2a67A|2e-27|17.3|156/163| RP:PFM:NREP 1 RP:PFM:REP 31->190|PF00857|2e-14|36.5|159/173|Isochorismatase| HM:PFM:NREP 1 HM:PFM:REP 32->205|PF00857|6.3e-41|32.4|173/174|Isochorismatase| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00857|IPR000868| GO:PFM GO:0008152|"GO:metabolic process"|PF00857|IPR000868| RP:SCP:NREP 1 RP:SCP:REP 2->207|1nf8A|2e-51|52.0|204/207|c.33.1.3| HM:SCP:REP 1->210|1nbaA_|6.7e-60|40.0|210/253|c.33.1.3|1/1|Isochorismatase-like hydrolases| OP:NHOMO 287 OP:NHOMOORG 229 OP:PATTERN --111-2---------1111-11-11111112-----------2---------1-------------- ----1------11-2----------1------1----112-1-1---------------------12-211----------11----------------------1--------------------------------------12------------------------------------------11---2111111112111111--22-2111----1-1-------1---------------1---1------------------------------------------------------------------------------------------------------------------------1--111--------121------1-111111111-----1--1---11----------11--------1------------------------------------------------------11------11111121----11--11-1-12-1---------------------------1-------------------1----------------------13-----------------------------11---1-------------------------------------1221-2-1111111111-112111111111111111122221111222222222222222221111111-----------------------------1-2---------------22222-1---1-2222----1-----111-------------1111112--1111----------------------------------------------------------1--112-2121-- -----------------------------------------------1------------------------------------------------------------1--------------------------------------------------------------------------1-1--1-21--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 211 STR:RPRED 95.5 SQ:SECSTR ##cccccccccccGGGcccccccccccTTcEEEEEEcccTTcccccccccTTHHHHHHHHHHHHHHHHHTTccEEEEEEcccEEcccTTcTTEEccTTccTTcTTTcccTTccccTTcEEEEEccccTTTTccHHHHHHHTTccEEEEEEEcTTTHHHHHHHHHHHHTcEEEcTTcEEccccccccHHHHHHHHTTTcEEccTTcEEcccHHH######## DISOP:02AL 215-221| PSIPRED cccccccccccccccccccccccccccccccEEEEEEccHHHccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccccccccccccccHHHHHHHHccccccEEEEccccccccccHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHccEEEcHHHHHHHHHHccccccccc //