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Thermobifida fusca YX (tfus0)
Gene : AAZ55920.1
DDBJ      :             similar to membrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:433 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   141->353 PF03631 * Ribonuclease_BN 8e-12 29.7 %
:HMM:PFM   98->352 PF03631 * Ribonuclease_BN 2.3e-41 32.4 244/258  
:BLT:SWISS 266->348 RBN_PSEHT 2e-07 30.1 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55920.1 GT:GENE AAZ55920.1 GT:PRODUCT similar to membrane protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2210686..2211987) GB:FROM 2210686 GB:TO 2211987 GB:DIRECTION - GB:PRODUCT similar to membrane protein GB:PROTEIN_ID AAZ55920.1 GB:DB_XREF GI:71916018 LENGTH 433 SQ:AASEQ MPSMICLPTKWEKFRESYHSVEGGSELRFVNGTARKPRRSPQGIRQNGHFRAMFEGVRPQWANLERLQEAVRTWPDRHPRSGAAAMLVARTVRSALRVRIIGLAAESAFFSLLSLPSLLLGLVGTLGHLSSVLGHQTVVEIRAWMLDLAATVLTAEAVQTTVEPLVDDFLGGAHGGVLSLTFLVSLWSGSRAMSVFIEAITIAYGLEGMRGYLRRRLLAFVAYLGALLFALVVLPAVVAGPDALRALLPAADTYLHLGYWPLVGLLSLGSIVALYTLSVPVRTSLVRQLPGAIAAVLILLCGTVGLRLYLEASFGQVNLYGPLTAPIIIVIWLYLTALAVLAGSSLNAEIDAMWPVAETARARAELAARRQASAVRLAERHEQALQRIAQAREQDTRVAESRAGKNSEVQSSPRPDRAAAARRRPARPRRRRR GT:EXON 1|1-433:0| BL:SWS:NREP 1 BL:SWS:REP 266->348|RBN_PSEHT|2e-07|30.1|83/300| COIL:NAA 24 COIL:NSEG 1 COIL:REGION 362->385| TM:NTM 6 TM:REGION 101->123| TM:REGION 177->199| TM:REGION 221->243| TM:REGION 257->279| TM:REGION 284->306| TM:REGION 324->346| SEG 111->135|sllslpslllglvgtlghlssvlgh| SEG 217->252|llafvaylgallfalvvlpavvagpdalrallpaad| SEG 357->374|aetararaelaarrqasa| SEG 413->432|prpdraaaarrrparprrrr| RP:PFM:NREP 1 RP:PFM:REP 141->353|PF03631|8e-12|29.7|209/258|Ribonuclease_BN| HM:PFM:NREP 1 HM:PFM:REP 98->352|PF03631|2.3e-41|32.4|244/258|Ribonuclease_BN| GO:PFM:NREP 1 GO:PFM GO:0004540|"GO:ribonuclease activity"|PF03631|IPR004664| OP:NHOMO 20 OP:NHOMOORG 20 OP:PATTERN -------------------------------------------------------------------- ----1----------------1--1------11-----11-1111-----------------1-1111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 32-45, 63-74, 374-375, 381-383, 386-433| PSIPRED ccccEEcccHHHHHHHHHHHccccccEEHHcccccccccccccccccccHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccHHccc //