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Thermobifida fusca YX (tfus0)
Gene : AAZ55946.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:259 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   17->217 3e7qA PDBj 6e-10 16.6 %
:RPS:SCOP  21->69 1jt0A1  a.4.1.9 * 1e-07 17.1 %
:RPS:SCOP  103->216 1zk8A2  a.121.1.1 * 7e-07 11.1 %
:HMM:SCOP  18->100 1t33A1 a.4.1.9 * 3.9e-14 36.6 %
:HMM:SCOP  102->217 1zk8A2 a.121.1.1 * 0.00028 19.8 %
:HMM:PFM   38->80 PF00440 * TetR_N 1.8e-15 44.2 43/47  
:BLT:SWISS 20->225 Y1846_MYCBO 1e-07 27.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ55946.1 GT:GENE AAZ55946.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2237834..2238613 GB:FROM 2237834 GB:TO 2238613 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID AAZ55946.1 GB:DB_XREF GI:71916044 InterPro:IPR001647 LENGTH 259 SQ:AASEQ MPKDTTFPARCETGAASVPMSRRMRIRAATLAEIKTIARNLLSAHGPGGVSLRAIAREMGMTAPALYRYFSSLDDLLLALRAEFFAELSAQITDASGRLPADDVDGRLLAALRAFRSWALANRAEFILLFGPRDEPFTTTEPHCAALQHEKQRFAAIFLSLFNRLLEEGRVPLPDTASFSPELRAQLHLFARDAGFAGANATEGALRVLTACWVRLYGLVCMEVFRSMPFTVGDLEPLFEAELCDVLTSIGVRYRAPHS GT:EXON 1|1-259:0| BL:SWS:NREP 1 BL:SWS:REP 20->225|Y1846_MYCBO|1e-07|27.0|196/234| SEG 70->90|fsslddlllalraeffaelsa| RP:PDB:NREP 1 RP:PDB:REP 17->217|3e7qA|6e-10|16.6|199/208| HM:PFM:NREP 1 HM:PFM:REP 38->80|PF00440|1.8e-15|44.2|43/47|TetR_N| RP:SCP:NREP 2 RP:SCP:REP 21->69|1jt0A1|1e-07|17.1|41/71|a.4.1.9| RP:SCP:REP 103->216|1zk8A2|7e-07|11.1|99/105|a.121.1.1| HM:SCP:REP 18->100|1t33A1|3.9e-14|36.6|82/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 102->217|1zk8A2|0.00028|19.8|101/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 25 OP:NHOMOORG 17 OP:PATTERN -------------------------------------------------------------------- --------------------------------1---2----315-1-------11---------12111-1---------------------------------------------------------------------1---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 202 STR:RPRED 78.0 SQ:SECSTR ################cHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHTcHHHHcGGGHHHHHHHHHHTHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHHHHHcTTcccHHHHHHHHHHHHHHHc######################################### DISOP:02AL 1-6, 8-32, 256-259| PSIPRED cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccc //