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Thermobifida fusca YX (tfus0)
Gene : AAZ56019.1
DDBJ      :             Iron-regulated ABC transporter permease protein SufD
Swiss-Prot:             

Homologs  Archaea  39/68 : Bacteria  565/915 : Eukaryota  24/199 : Viruses  0/175   --->[See Alignment]
b.80.6
:384 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->380 2zu0B PDBj 4e-22 26.5 %
:RPS:PDB   231->308 2byrB PDBj 6e-04 12.8 %
:RPS:SCOP  30->380 1vh4A  b.80.6.1 * 8e-45 22.3 %
:HMM:SCOP  31->380 1vh4A_ b.80.6.1 * 2e-92 35.1 %
:RPS:PFM   138->355 PF01458 * UPF0051 6e-39 41.2 %
:HMM:PFM   130->355 PF01458 * UPF0051 3.2e-67 35.7 224/230  
:BLT:SWISS 26->384 Y1497_MYCBO e-108 55.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56019.1 GT:GENE AAZ56019.1 GT:PRODUCT Iron-regulated ABC transporter permease protein SufD GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2318706..2319860) GB:FROM 2318706 GB:TO 2319860 GB:DIRECTION - GB:PRODUCT Iron-regulated ABC transporter permease protein SufD GB:PROTEIN_ID AAZ56019.1 GB:DB_XREF GI:71916117 InterPro:IPR011542 LENGTH 384 SQ:AASEQ MATPNLGIREHSHGGDLPVSKLVHGSFDPNDFPKPTGREEEWRFTPLRRLRGLHEGGSADGAVDVKVIAPDEVTVETVGRDDARLGTSFLPNDRVSALAYQAFREAVVVTVPKNTEVSEPVFLTVTGAQQDQAHGHVLVRVESAASATVVLEYRGSSVYADNVEFVVEDGGRLNVVSLQDWDRDAVHVSHQYTTVGRDASFRSIVVTLGGDLVRLSPKVSYSGPGGDAELFGLYFTGAGQHHEHRSLVDHNVSHTRSRVDYKGALSGEDAHAVWIGDVIIGEGTQGTDSYEHNRNLVLTDGTRVDSVPNLEIFTGEVEGAGHASTSGRLDDIHLFYLQSRGIPADEARRLVIRGFFAEIIDRIEVPELRDRIMAEVEEKLALHE GT:EXON 1|1-384:0| BL:SWS:NREP 1 BL:SWS:REP 26->384|Y1497_MYCBO|e-108|55.4|359/397| BL:PDB:NREP 1 BL:PDB:REP 35->380|2zu0B|4e-22|26.5|343/414| RP:PDB:NREP 1 RP:PDB:REP 231->308|2byrB|6e-04|12.8|78/210| RP:PFM:NREP 1 RP:PFM:REP 138->355|PF01458|6e-39|41.2|216/230|UPF0051| HM:PFM:NREP 1 HM:PFM:REP 130->355|PF01458|3.2e-67|35.7|224/230|UPF0051| GO:PFM:NREP 2 GO:PFM GO:0005515|"GO:protein binding"|PF01458|IPR000825| GO:PFM GO:0016226|"GO:iron-sulfur cluster assembly"|PF01458|IPR000825| RP:SCP:NREP 1 RP:SCP:REP 30->380|1vh4A|8e-45|22.3|349/410|b.80.6.1| HM:SCP:REP 31->380|1vh4A_|2e-92|35.1|348/413|b.80.6.1|1/1|Stabilizer of iron transporter SufD| OP:NHOMO 982 OP:NHOMOORG 628 OP:PATTERN 11-1112111111111-212111-22232223----------------------12---221211-22 --12222222222222222-222222222222222222222222222222222222222222222222222222222221112-----222211111--11111111112-------22211111-----------22222---2212222212211111121122111121-22111-122122222---222222222222222222222222222222221222222222222222222222222222222--22222-2222222222122222222222223332222222222222222222222223222222222---22------------22-------222--------------222---21-2222122122111221111111122212122221-11111111111111111111111122111122-2221111111111111111-11-----------------------------111121---------------------1111------2-------------12-------1----------121---1------11---------------11211---1----------------------21-----111-1--1-------------------1-1211-------11-1-111111111111-111111111111111111111111112111-1111111111-11111111111111111111111111-11111222211111--------------------------1-----------------1111111111-----------1--11111111111111----222222--------111-----------1------1------122221-111222 11-----11---------------------------------------------------------------------------------------------------1------------------------------------------------------------------1121N222122222-2111----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 344 STR:RPRED 89.6 SQ:SECSTR ##################################ccTTcTTccccccHHHHTcccccccHHHHHHHccccccEEEEEETEccccTTccccc#ccccccHHHHHHHHHcEEEcTTccccccEEEEcccccEEEEEEEEEEEEcTTcEEEEEEEEcccccEEEEEEEEEETTcEEEEEEEEEccTTcEEEEEEEEEEcTTcEEEEEEEEccccEEEEEEEEEEcccccEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEcGGGcccGGGGGGcccccEEETTcccccEEccccEEEEETTcEEEEccEEEEEcccccE#EEEEEEEEcccHHHHHHHHTTTccHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHTTc#### DISOP:02AL 1-4| PSIPRED cccccccEEEccccccccccccccccccHHHcccccccccccEEccHHHHHcccccccccccccccEEEcccEEEEcHHHHHHHccccccccHHHHHHHHHHHHccEEEEEccccEEcccEEEEEEcccccEEEEEEEEEEccccEEEEEEEEEccccEEEEEEEEEccccEEEEEEEEEEcccEEEEEEEEEEEEcccEEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEccccEEEEEEEEEEEEccccEEEEEEEEEEEccccEEEEEEEEEEcccccccccEEEEcEEEEccccEEEEEEEEEEEcccccEEEEEEEEEcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccc //