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Thermobifida fusca YX (tfus0)
Gene : AAZ56033.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  48/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:207 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->196 3cggB PDBj 6e-44 49.4 %
:RPS:PDB   6->108 1eg2A PDBj 1e-12 14.6 %
:RPS:SCOP  21->161 2i6gA1  c.66.1.44 * 7e-16 25.6 %
:HMM:SCOP  1->199 1xvaA_ c.66.1.5 * 3.7e-30 29.0 %
:RPS:PFM   48->149 PF05401 * NodS 1e-07 34.0 %
:HMM:PFM   53->149 PF08241 * Methyltransf_11 1.8e-13 29.7 91/95  
:BLT:SWISS 49->150 UBIG_XYLFM 3e-10 36.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56033.1 GT:GENE AAZ56033.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2334872..2335495) GB:FROM 2334872 GB:TO 2335495 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ56033.1 GB:DB_XREF GI:71916131 InterPro:IPR000051 LENGTH 207 SQ:AASEQ MRKITRWEAMVQQNPGHSRWYVERFRTMAAQGNDLAGEARMIDAMVGRGSRILDAGCGPGRVGGELAARGHHVVGVDIDPYLVNAAREDYPQGDWRVGDLAELDLVERGEEPFDLVVCAGNVMTFLAPGTEVEVLRRMGAHIRDGGRIVVGFGAGRGYPFERFFADVAEAGLVTELCLATWDLRPFTPESDFLVAVLGRAAETPPTG GT:EXON 1|1-207:0| BL:SWS:NREP 1 BL:SWS:REP 49->150|UBIG_XYLFM|3e-10|36.1|97/246| BL:PDB:NREP 1 BL:PDB:REP 14->196|3cggB|6e-44|49.4|178/182| RP:PDB:NREP 1 RP:PDB:REP 6->108|1eg2A|1e-12|14.6|103/270| RP:PFM:NREP 1 RP:PFM:REP 48->149|PF05401|1e-07|34.0|97/148|NodS| HM:PFM:NREP 1 HM:PFM:REP 53->149|PF08241|1.8e-13|29.7|91/95|Methyltransf_11| GO:PFM:NREP 3 GO:PFM GO:0008757|"GO:S-adenosylmethionine-dependent methyltransferase activity"|PF05401|IPR008715| GO:PFM GO:0009312|"GO:oligosaccharide biosynthetic process"|PF05401|IPR008715| GO:PFM GO:0009877|"GO:nodulation"|PF05401|IPR008715| RP:SCP:NREP 1 RP:SCP:REP 21->161|2i6gA1|7e-16|25.6|129/177|c.66.1.44| HM:SCP:REP 1->199|1xvaA_|3.7e-30|29.0|193/292|c.66.1.5|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 57 OP:NHOMOORG 49 OP:PATTERN -----------------------------------------------1-------------------- -----111111-1-111----2--11-----111111112-2-2-111-------1----121-21---21----------------------------------1--------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------2--1---------------------1--------------------1-1111------------------1-------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 206 STR:RPRED 99.5 SQ:SECSTR cccGGHccccccEEEcccccTTcccccccTTcccHHHHHHHHHHHccTTcEEEETTcTTcHHHHHHHHHTcEEEEEEccTHHHHHHHHHcccEEEEEcGGGTHHHHccEccccccccHHHHHHHHcTTccTTHHHHHHHHTEEEEEEEEEEcccGGGTTTHHHHHHHHHTTTcEEEEEEEEEccccccccccEEEEEccEEEcccH# DISOP:02AL 204-207| PSIPRED cccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHcccEEEEEcccHHHHHHHHHHcccccEEEEcHHHcccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccc //